Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 ARL2BPP2-201ENST00000550907 489 ntBASIC4.65□□□□□ -1.67
CBX4O00257 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.65□□□□□ -1.67
CBX4O00257 AC084783.1-201ENST00000565846 910 ntBASIC4.65□□□□□ -1.67
CBX4O00257 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.65□□□□□ -1.67
CBX4O00257 SNORD84-203ENST00000584275 78 ntBASIC4.65□□□□□ -1.67
CBX4O00257 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.65□□□□□ -1.67
CBX4O00257 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CBX4O00257 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.65□□□□□ -1.67
CBX4O00257 AL035413.2-201ENST00000604801 525 ntBASIC4.65□□□□□ -1.67
CBX4O00257 AL034351.1-201ENST00000605288 668 ntBASIC4.65□□□□□ -1.67
CBX4O00257 RMST_3.1-201ENST00000611651 109 ntBASIC4.65□□□□□ -1.67
CBX4O00257 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CBX4O00257 AC006504.8-201ENST00000621046 635 ntBASIC4.65□□□□□ -1.67
CBX4O00257 AC011944.2-201ENST00000624440 683 ntBASIC4.65□□□□□ -1.67
CBX4O00257 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.65□□□□□ -1.67
CBX4O00257 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
CBX4O00257 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CBX4O00257 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.65□□□□□ -1.67
CBX4O00257 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.65□□□□□ -1.67
CBX4O00257 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
CBX4O00257 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.65□□□□□ -1.67
CBX4O00257 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
CBX4O00257 AC010300.1-201ENST00000600671 5134 ntBASIC4.64□□□□□ -1.67
CBX4O00257 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CBX4O00257 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CBX4O00257 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.64□□□□□ -1.67
CBX4O00257 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CBX4O00257 RAD17P1-201ENST00000418130 2042 ntBASIC4.64□□□□□ -1.67
CBX4O00257 RNU6-1284P-201ENST00000363701 100 ntBASIC4.64□□□□□ -1.67
CBX4O00257 MIR124-3-201ENST00000384866 87 ntBASIC4.64□□□□□ -1.67
CBX4O00257 SDHCP2-201ENST00000398565 501 ntBASIC4.64□□□□□ -1.67
CBX4O00257 AL354719.1-201ENST00000406535 843 ntBASIC4.64□□□□□ -1.67
CBX4O00257 AL583834.1-201ENST00000406943 343 ntBASIC4.64□□□□□ -1.67
CBX4O00257 RNU2-36P-201ENST00000410361 191 ntBASIC4.64□□□□□ -1.67
CBX4O00257 RPS7P15-201ENST00000415804 584 ntBASIC4.64□□□□□ -1.67
CBX4O00257 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.64□□□□□ -1.67
CBX4O00257 AC099677.1-201ENST00000420575 175 ntBASIC4.64□□□□□ -1.67
CBX4O00257 RPL7AP25-201ENST00000423357 805 ntBASIC4.64□□□□□ -1.67
CBX4O00257 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.64□□□□□ -1.67
CBX4O00257 MTND3P23-201ENST00000431980 347 ntBASIC4.64□□□□□ -1.67
CBX4O00257 MTATP6P16-201ENST00000434543 526 ntBASIC4.64□□□□□ -1.67
CBX4O00257 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.64□□□□□ -1.67
CBX4O00257 AL162389.1-201ENST00000449233 177 ntBASIC4.64□□□□□ -1.67
CBX4O00257 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.64□□□□□ -1.67
CBX4O00257 RNU7-182P-201ENST00000459009 62 ntBASIC4.64□□□□□ -1.67
CBX4O00257 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CBX4O00257 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.64□□□□□ -1.67
CBX4O00257 AC026427.2-201ENST00000506228 536 ntBASIC4.64□□□□□ -1.67
CBX4O00257 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.64□□□□□ -1.67
CBX4O00257 AC100870.1-201ENST00000522035 505 ntBASIC4.64□□□□□ -1.67
CBX4O00257 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.64□□□□□ -1.67
CBX4O00257 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.64□□□□□ -1.67
CBX4O00257 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.64□□□□□ -1.67
CBX4O00257 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.64□□□□□ -1.67
CBX4O00257 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.64□□□□□ -1.67
CBX4O00257 MIR3939-201ENST00000582614 106 ntBASIC4.64□□□□□ -1.67
CBX4O00257 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
CBX4O00257 MIR4293-201ENST00000584305 78 ntBASIC4.64□□□□□ -1.67
CBX4O00257 AC009994.1-201ENST00000606889 253 ntBASIC4.64□□□□□ -1.67
CBX4O00257 TUG1_2.1-201ENST00000614234 87 ntBASIC4.64□□□□□ -1.67
CBX4O00257 AL359314.1-201ENST00000616913 261 ntBASIC4.64□□□□□ -1.67
CBX4O00257 SNHG22-203ENST00000617833 660 ntBASIC4.64□□□□□ -1.67
CBX4O00257 AC243312.2-201ENST00000623340 601 ntBASIC4.64□□□□□ -1.67
CBX4O00257 MAPK10-320ENST00000641462 6696 ntBASIC4.64□□□□□ -1.67
CBX4O00257 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CBX4O00257 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CBX4O00257 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CBX4O00257 AL354685.2-201ENST00000448218 1447 ntBASIC4.63□□□□□ -1.67
CBX4O00257 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CBX4O00257 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.63□□□□□ -1.67
CBX4O00257 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.63□□□□□ -1.67
CBX4O00257 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CBX4O00257 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CBX4O00257 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CBX4O00257 Y_RNA.72-201ENST00000362894 103 ntBASIC4.63□□□□□ -1.67
CBX4O00257 Y_RNA.86-201ENST00000363020 111 ntBASIC4.63□□□□□ -1.67
CBX4O00257 Y_RNA.157-201ENST00000363638 102 ntBASIC4.63□□□□□ -1.67
CBX4O00257 RNU5E-6P-201ENST00000365574 115 ntBASIC4.63□□□□□ -1.67
CBX4O00257 SNORD37.1-201ENST00000390968 65 ntBASIC4.63□□□□□ -1.67
CBX4O00257 RNU2-43P-201ENST00000410306 190 ntBASIC4.63□□□□□ -1.67
CBX4O00257 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CBX4O00257 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.63□□□□□ -1.67
CBX4O00257 RPL36AP6-201ENST00000435770 321 ntBASIC4.63□□□□□ -1.67
CBX4O00257 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.63□□□□□ -1.67
CBX4O00257 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.63□□□□□ -1.67
CBX4O00257 RPS26P2-201ENST00000440331 348 ntBASIC4.63□□□□□ -1.67
CBX4O00257 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CBX4O00257 CACYBPP2-201ENST00000453625 678 ntBASIC4.63□□□□□ -1.67
CBX4O00257 PMCHL2-203ENST00000457791 237 ntBASIC4.63□□□□□ -1.67
CBX4O00257 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.63□□□□□ -1.67
CBX4O00257 CYCSP34-201ENST00000458172 304 ntBASIC4.63□□□□□ -1.67
CBX4O00257 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.63□□□□□ -1.67
CBX4O00257 AC008481.1-201ENST00000463278 396 ntBASIC4.63□□□□□ -1.67
CBX4O00257 RPS27AP17-201ENST00000463344 455 ntBASIC4.63□□□□□ -1.67
CBX4O00257 GMFBP1-201ENST00000467831 427 ntBASIC4.63□□□□□ -1.67
CBX4O00257 RPL21P126-201ENST00000470049 478 ntBASIC4.63□□□□□ -1.67
CBX4O00257 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.63□□□□□ -1.67
CBX4O00257 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.63□□□□□ -1.67
CBX4O00257 AC134698.5-201ENST00000519444 336 ntBASIC4.63□□□□□ -1.67
CBX4O00257 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms