Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC188H7C350 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC188H7C350 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CCDC188H7C350 RPL21P132-201ENST00000331267 462 ntBASIC3.46□□□□□ -1.86
CCDC188H7C350 RNA5SP197-201ENST00000363357 119 ntBASIC3.46□□□□□ -1.86
CCDC188H7C350 U3.6-201ENST00000363622 211 ntBASIC3.46□□□□□ -1.86
CCDC188H7C350 RNU6-1078P-201ENST00000364522 103 ntBASIC3.46□□□□□ -1.86
CCDC188H7C350 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CCDC188H7C350 RPL21P3-201ENST00000395517 478 ntBASIC3.46□□□□□ -1.86
CCDC188H7C350 RPS15AP38-201ENST00000413110 372 ntBASIC3.46□□□□□ -1.86
CCDC188H7C350 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC188H7C350 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC188H7C350 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC188H7C350 AL117351.1-201ENST00000438864 766 ntBASIC3.46□□□□□ -1.86
CCDC188H7C350 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC188H7C350 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC188H7C350 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC188H7C350 SSXP4-201ENST00000451349 245 ntBASIC3.46□□□□□ -1.86
CCDC188H7C350 AL109741.2-201ENST00000455561 343 ntBASIC3.46□□□□□ -1.86
CCDC188H7C350 AC146507.2-201ENST00000460608 476 ntBASIC3.46□□□□□ -1.86
CCDC188H7C350 RPL30P9-201ENST00000465586 330 ntBASIC3.46□□□□□ -1.86
CCDC188H7C350 AP002884.2-201ENST00000471647 395 ntBASIC3.46□□□□□ -1.86
CCDC188H7C350 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC188H7C350 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC188H7C350 MTND4LP31-201ENST00000514859 294 ntBASIC3.46□□□□□ -1.86
CCDC188H7C350 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.46□□□□□ -1.86
CCDC188H7C350 RN7SKP287-201ENST00000516546 266 ntBASIC3.46□□□□□ -1.86
CCDC188H7C350 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC188H7C350 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC188H7C350 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC188H7C350 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC188H7C350 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC188H7C350 UBE2NP1-201ENST00000545592 458 ntBASIC3.46□□□□□ -1.86
CCDC188H7C350 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC188H7C350 AL353997.4-201ENST00000586196 166 ntBASIC3.46□□□□□ -1.86
CCDC188H7C350 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC188H7C350 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC188H7C350 BNIP3P23-201ENST00000599655 511 ntBASIC3.46□□□□□ -1.86
CCDC188H7C350 AL357094.1-201ENST00000603845 844 ntBASIC3.46□□□□□ -1.86
CCDC188H7C350 AC245389.1-201ENST00000605141 529 ntBASIC3.46□□□□□ -1.86
CCDC188H7C350 uc_338.1-201ENST00000612113 180 ntBASIC3.46□□□□□ -1.86
CCDC188H7C350 AP000676.4-201ENST00000624659 623 ntBASIC3.46□□□□□ -1.86
CCDC188H7C350 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CCDC188H7C350 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC188H7C350 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC188H7C350 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.46□□□□□ -1.86
CCDC188H7C350 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC188H7C350 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC188H7C350 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC188H7C350 AC092326.2-201ENST00000624772 1561 ntBASIC3.46□□□□□ -1.86
CCDC188H7C350 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC188H7C350 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC188H7C350 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.45□□□□□ -1.86
CCDC188H7C350 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC188H7C350 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CCDC188H7C350 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC188H7C350 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC188H7C350 RNU6-723P-201ENST00000383973 107 ntBASIC3.45□□□□□ -1.86
CCDC188H7C350 MIR493-201ENST00000385254 89 ntBASIC3.45□□□□□ -1.86
CCDC188H7C350 AC109780.2-201ENST00000413467 845 ntBASIC3.45□□□□□ -1.86
CCDC188H7C350 AL035407.1-201ENST00000429211 571 ntBASIC3.45□□□□□ -1.86
CCDC188H7C350 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC188H7C350 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC188H7C350 ARPC3P2-201ENST00000457786 533 ntBASIC3.45□□□□□ -1.86
CCDC188H7C350 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC188H7C350 MTND2P14-201ENST00000482139 351 ntBASIC3.45□□□□□ -1.86
CCDC188H7C350 AC021382.1-201ENST00000483523 359 ntBASIC3.45□□□□□ -1.86
CCDC188H7C350 AP002812.1-201ENST00000495378 474 ntBASIC3.45□□□□□ -1.86
CCDC188H7C350 AC147055.4-201ENST00000504399 745 ntBASIC3.45□□□□□ -1.86
CCDC188H7C350 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC188H7C350 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC188H7C350 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC188H7C350 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC188H7C350 FCF1P8-201ENST00000510322 597 ntBASIC3.45□□□□□ -1.86
CCDC188H7C350 AC022483.1-201ENST00000514020 567 ntBASIC3.45□□□□□ -1.86
CCDC188H7C350 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC188H7C350 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC188H7C350 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC188H7C350 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC188H7C350 AP005205.1-201ENST00000563503 508 ntBASIC3.45□□□□□ -1.86
CCDC188H7C350 AC034105.4-201ENST00000568304 277 ntBASIC3.45□□□□□ -1.86
CCDC188H7C350 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC188H7C350 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.45□□□□□ -1.86
CCDC188H7C350 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC188H7C350 BDH2P1-201ENST00000602288 736 ntBASIC3.45□□□□□ -1.86
CCDC188H7C350 AP001429.1-201ENST00000602568 530 ntBASIC3.45□□□□□ -1.86
CCDC188H7C350 AC008962.1-201ENST00000605729 304 ntBASIC3.45□□□□□ -1.86
CCDC188H7C350 AL591516.1-201ENST00000611326 274 ntBASIC3.45□□□□□ -1.86
CCDC188H7C350 MIR8058-201ENST00000615737 89 ntBASIC3.45□□□□□ -1.86
CCDC188H7C350 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC188H7C350 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.45□□□□□ -1.86
CCDC188H7C350 AC002550.2-201ENST00000621246 394 ntBASIC3.45□□□□□ -1.86
CCDC188H7C350 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC188H7C350 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC188H7C350 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CCDC188H7C350 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC188H7C350 AL353746.1-201ENST00000566293 6881 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC188H7C350 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC188H7C350 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms