Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SHISA3A0PJX4 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.61□□□□□ -1.67
SHISA3A0PJX4 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.61□□□□□ -1.67
SHISA3A0PJX4 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SHISA3A0PJX4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SHISA3A0PJX4 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SHISA3A0PJX4 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHISA3A0PJX4 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SHISA3A0PJX4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.61□□□□□ -1.67
SHISA3A0PJX4 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHISA3A0PJX4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.61□□□□□ -1.67
SHISA3A0PJX4 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SHISA3A0PJX4 Y_RNA.2-201ENST00000362330 96 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 RNU6-99P-201ENST00000364721 107 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 RN7SKP15-201ENST00000364742 309 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 DEFB109C-201ENST00000382575 264 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 DEFB109B-201ENST00000382656 264 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 RNU6-45P-201ENST00000384471 107 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SHISA3A0PJX4 AL590704.1-201ENST00000402856 794 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 RPS4XP7-201ENST00000406274 780 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 MIR1271-201ENST00000408537 86 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 RNU6-101P-201ENST00000410323 104 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 RNU6-55P-201ENST00000411092 107 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.61□□□□□ -1.67
SHISA3A0PJX4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SHISA3A0PJX4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.61□□□□□ -1.67
SHISA3A0PJX4 PPP1R11P2-201ENST00000423543 382 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 AL160275.3-201ENST00000423876 471 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.61□□□□□ -1.67
SHISA3A0PJX4 AC113412.1-201ENST00000425840 504 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 USP9YP30-201ENST00000430729 455 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 AC090774.1-201ENST00000435925 246 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 RHOT1P3-201ENST00000436571 331 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.61□□□□□ -1.67
SHISA3A0PJX4 RNU7-138P-201ENST00000459479 64 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 AC084198.1-201ENST00000477747 402 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 AC090686.1-201ENST00000481577 749 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 PPIAP19-201ENST00000486414 492 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 HIGD1AP14-201ENST00000507617 282 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.61□□□□□ -1.67
SHISA3A0PJX4 RN7SKP258-201ENST00000517151 304 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 AC025423.5-201ENST00000550230 219 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.61□□□□□ -1.67
SHISA3A0PJX4 AC092447.9-201ENST00000603395 144 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 AL450472.3-201ENST00000615578 367 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.61□□□□□ -1.67
SHISA3A0PJX4 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SHISA3A0PJX4 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHISA3A0PJX4 AC093849.1-201ENST00000563631 2209 ntBASIC4.61□□□□□ -1.67
SHISA3A0PJX4 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHISA3A0PJX4 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHISA3A0PJX4 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 RN7SKP153-201ENST00000365026 316 ntBASIC4.6□□□□□ -1.67
SHISA3A0PJX4 SNORA63.7-201ENST00000365579 123 ntBASIC4.6□□□□□ -1.67
SHISA3A0PJX4 Y_RNA.380-201ENST00000365663 111 ntBASIC4.6□□□□□ -1.67
SHISA3A0PJX4 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 RNU6-306P-201ENST00000384617 107 ntBASIC4.6□□□□□ -1.67
SHISA3A0PJX4 MIR551A-201ENST00000385042 96 ntBASIC4.6□□□□□ -1.67
SHISA3A0PJX4 U3.25-201ENST00000391209 220 ntBASIC4.6□□□□□ -1.67
SHISA3A0PJX4 HMGN1P20-201ENST00000411849 300 ntBASIC4.6□□□□□ -1.67
SHISA3A0PJX4 AC092809.3-201ENST00000415453 231 ntBASIC4.6□□□□□ -1.67
SHISA3A0PJX4 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.6□□□□□ -1.67
SHISA3A0PJX4 RPL35AP21-201ENST00000437667 333 ntBASIC4.6□□□□□ -1.67
SHISA3A0PJX4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 PTMAP6-201ENST00000439110 327 ntBASIC4.6□□□□□ -1.67
SHISA3A0PJX4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 AC002553.2-201ENST00000453217 340 ntBASIC4.6□□□□□ -1.67
SHISA3A0PJX4 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 AC022133.1-201ENST00000490961 571 ntBASIC4.6□□□□□ -1.67
SHISA3A0PJX4 HMGB3P16-201ENST00000508037 287 ntBASIC4.6□□□□□ -1.67
SHISA3A0PJX4 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 AC114781.3-201ENST00000512083 142 ntBASIC4.6□□□□□ -1.67
SHISA3A0PJX4 RNA5SP384-201ENST00000516615 116 ntBASIC4.6□□□□□ -1.67
SHISA3A0PJX4 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.6□□□□□ -1.67
SHISA3A0PJX4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 AC079905.1-201ENST00000549280 475 ntBASIC4.6□□□□□ -1.67
SHISA3A0PJX4 OR4H12P-201ENST00000556269 907 ntBASIC4.6□□□□□ -1.67
SHISA3A0PJX4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 AC024884.1-201ENST00000620583 399 ntBASIC4.6□□□□□ -1.67
SHISA3A0PJX4 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.6□□□□□ -1.67
SHISA3A0PJX4 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms