Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ECHDC1Q9NTX5 FEM1AP3-201ENST00000403722 1741 ntBASIC23.36■■□□□ 1.33
ECHDC1Q9NTX5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ECHDC1Q9NTX5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ECHDC1Q9NTX5 UBQLN4P1-201ENST00000461599 1801 ntBASIC23.36■■□□□ 1.33
ECHDC1Q9NTX5 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ECHDC1Q9NTX5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
ECHDC1Q9NTX5 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
ECHDC1Q9NTX5 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ECHDC1Q9NTX5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
ECHDC1Q9NTX5 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
ECHDC1Q9NTX5 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC23.35■■□□□ 1.33
ECHDC1Q9NTX5 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC23.35■■□□□ 1.33
ECHDC1Q9NTX5 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
ECHDC1Q9NTX5 FP475955.4-201ENST00000623131 1990 ntBASIC23.35■■□□□ 1.33
ECHDC1Q9NTX5 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
ECHDC1Q9NTX5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
ECHDC1Q9NTX5 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC23.35■■□□□ 1.33
ECHDC1Q9NTX5 PRSS44-201ENST00000515154 1146 ntBASIC23.35■■□□□ 1.33
ECHDC1Q9NTX5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.35■■□□□ 1.33
ECHDC1Q9NTX5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC23.35■■□□□ 1.33
ECHDC1Q9NTX5 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ECHDC1Q9NTX5 DGCR10-201ENST00000609839 495 ntBASIC23.35■■□□□ 1.33
ECHDC1Q9NTX5 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ECHDC1Q9NTX5 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC23.35■■□□□ 1.33
ECHDC1Q9NTX5 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ECHDC1Q9NTX5 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ECHDC1Q9NTX5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC23.35■■□□□ 1.33
ECHDC1Q9NTX5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC23.35■■□□□ 1.33
ECHDC1Q9NTX5 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
ECHDC1Q9NTX5 KRT17P2-201ENST00000300992 1314 ntBASIC23.34■■□□□ 1.33
ECHDC1Q9NTX5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ECHDC1Q9NTX5 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ECHDC1Q9NTX5 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
ECHDC1Q9NTX5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ECHDC1Q9NTX5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ECHDC1Q9NTX5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
ECHDC1Q9NTX5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ECHDC1Q9NTX5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
ECHDC1Q9NTX5 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC23.34■■□□□ 1.33
ECHDC1Q9NTX5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.34■■□□□ 1.33
ECHDC1Q9NTX5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ECHDC1Q9NTX5 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ECHDC1Q9NTX5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ECHDC1Q9NTX5 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ECHDC1Q9NTX5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC23.34■■□□□ 1.33
ECHDC1Q9NTX5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ECHDC1Q9NTX5 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ECHDC1Q9NTX5 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ECHDC1Q9NTX5 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC23.33■■□□□ 1.33
ECHDC1Q9NTX5 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
ECHDC1Q9NTX5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ECHDC1Q9NTX5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ECHDC1Q9NTX5 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ECHDC1Q9NTX5 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ECHDC1Q9NTX5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
ECHDC1Q9NTX5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC23.33■■□□□ 1.33
ECHDC1Q9NTX5 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.33■■□□□ 1.33
ECHDC1Q9NTX5 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC23.33■■□□□ 1.33
ECHDC1Q9NTX5 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC23.33■■□□□ 1.33
ECHDC1Q9NTX5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
ECHDC1Q9NTX5 CKBP1-201ENST00000565489 1086 ntBASIC23.33■■□□□ 1.33
ECHDC1Q9NTX5 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC23.33■■□□□ 1.33
ECHDC1Q9NTX5 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
ECHDC1Q9NTX5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC23.33■■□□□ 1.33
ECHDC1Q9NTX5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ECHDC1Q9NTX5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
ECHDC1Q9NTX5 AL049812.1-201ENST00000432563 2267 ntBASIC23.33■■□□□ 1.32
ECHDC1Q9NTX5 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
ECHDC1Q9NTX5 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
ECHDC1Q9NTX5 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC23.32■■□□□ 1.32
ECHDC1Q9NTX5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
ECHDC1Q9NTX5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC23.32■■□□□ 1.32
ECHDC1Q9NTX5 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC23.32■■□□□ 1.32
ECHDC1Q9NTX5 RBM17P1-201ENST00000453646 1190 ntBASIC23.32■■□□□ 1.32
ECHDC1Q9NTX5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC23.32■■□□□ 1.32
ECHDC1Q9NTX5 AL355075.4-201ENST00000554988 638 ntBASIC23.32■■□□□ 1.32
ECHDC1Q9NTX5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC23.32■■□□□ 1.32
ECHDC1Q9NTX5 SNX21-213ENST00000614929 587 ntTSL 5 BASIC23.32■■□□□ 1.32
ECHDC1Q9NTX5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC23.32■■□□□ 1.32
ECHDC1Q9NTX5 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ECHDC1Q9NTX5 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
ECHDC1Q9NTX5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
ECHDC1Q9NTX5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ECHDC1Q9NTX5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.32■■□□□ 1.32
ECHDC1Q9NTX5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
ECHDC1Q9NTX5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
ECHDC1Q9NTX5 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ECHDC1Q9NTX5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ECHDC1Q9NTX5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC23.31■■□□□ 1.32
ECHDC1Q9NTX5 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC23.31■■□□□ 1.32
ECHDC1Q9NTX5 AC096733.2-201ENST00000609937 1394 ntBASIC23.31■■□□□ 1.32
ECHDC1Q9NTX5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ECHDC1Q9NTX5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ECHDC1Q9NTX5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
ECHDC1Q9NTX5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.31■■□□□ 1.32
ECHDC1Q9NTX5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC23.31■■□□□ 1.32
ECHDC1Q9NTX5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
ECHDC1Q9NTX5 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC23.31■■□□□ 1.32
ECHDC1Q9NTX5 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms