Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
HIPK3Q9H422 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HIPK3Q9H422 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.93■□□□□ 0.94
HIPK3Q9H422 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HIPK3Q9H422 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
HIPK3Q9H422 UNC93B7-201ENST00000509439 705 ntBASIC20.93■□□□□ 0.94
HIPK3Q9H422 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HIPK3Q9H422 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.93■□□□□ 0.94
HIPK3Q9H422 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.93■□□□□ 0.94
HIPK3Q9H422 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.93■□□□□ 0.94
HIPK3Q9H422 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.93■□□□□ 0.94
HIPK3Q9H422 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.93■□□□□ 0.94
HIPK3Q9H422 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
HIPK3Q9H422 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
HIPK3Q9H422 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HIPK3Q9H422 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HIPK3Q9H422 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.92■□□□□ 0.94
HIPK3Q9H422 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HIPK3Q9H422 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HIPK3Q9H422 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.92■□□□□ 0.94
HIPK3Q9H422 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
HIPK3Q9H422 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HIPK3Q9H422 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HIPK3Q9H422 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
HIPK3Q9H422 PVRIG2P-201ENST00000435460 978 ntBASIC20.92■□□□□ 0.94
HIPK3Q9H422 KRT17P6-201ENST00000453795 1220 ntBASIC20.92■□□□□ 0.94
HIPK3Q9H422 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.92■□□□□ 0.94
HIPK3Q9H422 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HIPK3Q9H422 KRT8P10-201ENST00000450021 1447 ntBASIC20.92■□□□□ 0.94
HIPK3Q9H422 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HIPK3Q9H422 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.92■□□□□ 0.94
HIPK3Q9H422 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HIPK3Q9H422 AC009237.14-201ENST00000609975 1594 ntBASIC20.92■□□□□ 0.94
HIPK3Q9H422 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.92■□□□□ 0.94
HIPK3Q9H422 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.92■□□□□ 0.94
HIPK3Q9H422 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.92■□□□□ 0.94
HIPK3Q9H422 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HIPK3Q9H422 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HIPK3Q9H422 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HIPK3Q9H422 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HIPK3Q9H422 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HIPK3Q9H422 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.91■□□□□ 0.94
HIPK3Q9H422 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
HIPK3Q9H422 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
HIPK3Q9H422 AP000347.1-202ENST00000435868 847 ntBASIC20.91■□□□□ 0.94
HIPK3Q9H422 AP002383.4-201ENST00000442518 975 ntBASIC20.91■□□□□ 0.94
HIPK3Q9H422 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.91■□□□□ 0.94
HIPK3Q9H422 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.91■□□□□ 0.94
HIPK3Q9H422 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.91■□□□□ 0.94
HIPK3Q9H422 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.91■□□□□ 0.94
HIPK3Q9H422 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.91■□□□□ 0.94
HIPK3Q9H422 AC024243.1-201ENST00000609234 778 ntBASIC20.91■□□□□ 0.94
HIPK3Q9H422 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HIPK3Q9H422 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.91■□□□□ 0.94
HIPK3Q9H422 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HIPK3Q9H422 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
HIPK3Q9H422 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.9■□□□□ 0.94
HIPK3Q9H422 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
HIPK3Q9H422 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
HIPK3Q9H422 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIPK3Q9H422 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
HIPK3Q9H422 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.9■□□□□ 0.94
HIPK3Q9H422 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.9■□□□□ 0.94
HIPK3Q9H422 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIPK3Q9H422 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.9■□□□□ 0.94
HIPK3Q9H422 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
HIPK3Q9H422 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.9■□□□□ 0.94
HIPK3Q9H422 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HIPK3Q9H422 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIPK3Q9H422 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIPK3Q9H422 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.9■□□□□ 0.94
HIPK3Q9H422 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.9■□□□□ 0.94
HIPK3Q9H422 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.9■□□□□ 0.94
HIPK3Q9H422 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIPK3Q9H422 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HIPK3Q9H422 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.9■□□□□ 0.94
HIPK3Q9H422 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIPK3Q9H422 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIPK3Q9H422 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIPK3Q9H422 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.9■□□□□ 0.94
HIPK3Q9H422 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HIPK3Q9H422 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
HIPK3Q9H422 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HIPK3Q9H422 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HIPK3Q9H422 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HIPK3Q9H422 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HIPK3Q9H422 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HIPK3Q9H422 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HIPK3Q9H422 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HIPK3Q9H422 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.89■□□□□ 0.93
HIPK3Q9H422 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HIPK3Q9H422 AC020907.5-201ENST00000624372 1936 ntBASIC20.89■□□□□ 0.93
HIPK3Q9H422 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.89■□□□□ 0.93
HIPK3Q9H422 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.89■□□□□ 0.93
HIPK3Q9H422 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
HIPK3Q9H422 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
HIPK3Q9H422 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.89■□□□□ 0.93
HIPK3Q9H422 AP002414.4-201ENST00000589764 1148 ntBASIC20.89■□□□□ 0.93
HIPK3Q9H422 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.89■□□□□ 0.93
HIPK3Q9H422 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms