Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.38■□□□□ 0.85
CDH23Q9H251 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CDH23Q9H251 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH23Q9H251 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH23Q9H251 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH23Q9H251 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH23Q9H251 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.37■□□□□ 0.85
CDH23Q9H251 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CDH23Q9H251 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.37■□□□□ 0.85
CDH23Q9H251 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.37■□□□□ 0.85
CDH23Q9H251 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH23Q9H251 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CDH23Q9H251 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDH23Q9H251 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
CDH23Q9H251 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH23Q9H251 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.37■□□□□ 0.85
CDH23Q9H251 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDH23Q9H251 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH23Q9H251 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.37■□□□□ 0.85
CDH23Q9H251 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.37■□□□□ 0.85
CDH23Q9H251 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.37■□□□□ 0.85
CDH23Q9H251 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CDH23Q9H251 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDH23Q9H251 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.37■□□□□ 0.85
CDH23Q9H251 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.37■□□□□ 0.85
CDH23Q9H251 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CDH23Q9H251 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CDH23Q9H251 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CDH23Q9H251 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CDH23Q9H251 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH23Q9H251 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH23Q9H251 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH23Q9H251 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDH23Q9H251 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.36■□□□□ 0.85
CDH23Q9H251 AF238378.1-201ENST00000526806 358 ntBASIC20.36■□□□□ 0.85
CDH23Q9H251 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.36■□□□□ 0.85
CDH23Q9H251 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.36■□□□□ 0.85
CDH23Q9H251 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH23Q9H251 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH23Q9H251 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.36■□□□□ 0.85
CDH23Q9H251 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.36■□□□□ 0.85
CDH23Q9H251 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH23Q9H251 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH23Q9H251 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH23Q9H251 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.36■□□□□ 0.85
CDH23Q9H251 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH23Q9H251 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH23Q9H251 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH23Q9H251 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH23Q9H251 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH23Q9H251 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH23Q9H251 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.36■□□□□ 0.85
CDH23Q9H251 LINC00265-3P-201ENST00000447588 903 ntBASIC20.36■□□□□ 0.85
CDH23Q9H251 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH23Q9H251 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CDH23Q9H251 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CDH23Q9H251 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH23Q9H251 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.35■□□□□ 0.85
CDH23Q9H251 AL773604.1-201ENST00000617417 272 ntBASIC20.35■□□□□ 0.85
CDH23Q9H251 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDH23Q9H251 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH23Q9H251 AL049796.1-201ENST00000565336 1766 ntBASIC20.35■□□□□ 0.85
CDH23Q9H251 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDH23Q9H251 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CDH23Q9H251 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.35■□□□□ 0.85
CDH23Q9H251 GPAT2P1-201ENST00000444924 1672 ntBASIC20.35■□□□□ 0.85
CDH23Q9H251 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH23Q9H251 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH23Q9H251 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CDH23Q9H251 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDH23Q9H251 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDH23Q9H251 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDH23Q9H251 RNF126P1-202ENST00000569893 925 ntBASIC20.35■□□□□ 0.85
CDH23Q9H251 AL121772.3-201ENST00000610840 674 ntBASIC20.35■□□□□ 0.85
CDH23Q9H251 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.35■□□□□ 0.85
CDH23Q9H251 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.35■□□□□ 0.85
CDH23Q9H251 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH23Q9H251 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH23Q9H251 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH23Q9H251 MIR564-202ENST00000385049 94 ntBASIC20.34■□□□□ 0.85
CDH23Q9H251 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDH23Q9H251 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.34■□□□□ 0.85
CDH23Q9H251 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.34■□□□□ 0.85
CDH23Q9H251 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.34■□□□□ 0.85
CDH23Q9H251 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH23Q9H251 AL117328.2-201ENST00000624617 1940 ntBASIC20.34■□□□□ 0.85
CDH23Q9H251 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH23Q9H251 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.34■□□□□ 0.85
CDH23Q9H251 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CDH23Q9H251 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDH23Q9H251 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH23Q9H251 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH23Q9H251 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDH23Q9H251 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.34■□□□□ 0.85
CDH23Q9H251 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDH23Q9H251 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH23Q9H251 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CDH23Q9H251 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH23Q9H251 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CDH23Q9H251 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms