Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ZNF428Q96B54 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC24.64■■□□□ 1.54
ZNF428Q96B54 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
ZNF428Q96B54 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC24.64■■□□□ 1.54
ZNF428Q96B54 TSPY23P-201ENST00000440136 739 ntBASIC24.64■■□□□ 1.54
ZNF428Q96B54 AC145285.6-201ENST00000604632 637 ntBASIC24.64■■□□□ 1.54
ZNF428Q96B54 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC24.64■■□□□ 1.53
ZNF428Q96B54 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
ZNF428Q96B54 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
ZNF428Q96B54 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC24.64■■□□□ 1.53
ZNF428Q96B54 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
ZNF428Q96B54 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC24.64■■□□□ 1.53
ZNF428Q96B54 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
ZNF428Q96B54 PTGES2-AS1-201ENST00000443493 2100 ntBASIC24.64■■□□□ 1.53
ZNF428Q96B54 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC24.64■■□□□ 1.53
ZNF428Q96B54 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
ZNF428Q96B54 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ZNF428Q96B54 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC24.63■■□□□ 1.53
ZNF428Q96B54 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
ZNF428Q96B54 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
ZNF428Q96B54 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC24.63■■□□□ 1.53
ZNF428Q96B54 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC24.63■■□□□ 1.53
ZNF428Q96B54 PRSS44-201ENST00000515154 1146 ntBASIC24.63■■□□□ 1.53
ZNF428Q96B54 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
ZNF428Q96B54 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
ZNF428Q96B54 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ZNF428Q96B54 FEM1AP3-201ENST00000403722 1741 ntBASIC24.63■■□□□ 1.53
ZNF428Q96B54 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC24.63■■□□□ 1.53
ZNF428Q96B54 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
ZNF428Q96B54 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
ZNF428Q96B54 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
ZNF428Q96B54 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ZNF428Q96B54 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC24.62■■□□□ 1.53
ZNF428Q96B54 FP475955.4-201ENST00000623131 1990 ntBASIC24.62■■□□□ 1.53
ZNF428Q96B54 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
ZNF428Q96B54 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC24.62■■□□□ 1.53
ZNF428Q96B54 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ZNF428Q96B54 CRYGFP-201ENST00000418459 633 ntBASIC24.62■■□□□ 1.53
ZNF428Q96B54 AC091390.4-202ENST00000476426 537 ntBASIC24.62■■□□□ 1.53
ZNF428Q96B54 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC24.62■■□□□ 1.53
ZNF428Q96B54 NAPSB-206ENST00000562112 1266 ntBASIC24.62■■□□□ 1.53
ZNF428Q96B54 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC24.62■■□□□ 1.53
ZNF428Q96B54 AL445228.2-201ENST00000605589 952 ntBASIC24.62■■□□□ 1.53
ZNF428Q96B54 GAS2L1P1-201ENST00000420145 1480 ntBASIC24.62■■□□□ 1.53
ZNF428Q96B54 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
ZNF428Q96B54 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ZNF428Q96B54 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
ZNF428Q96B54 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
ZNF428Q96B54 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
ZNF428Q96B54 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ZNF428Q96B54 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
ZNF428Q96B54 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
ZNF428Q96B54 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ZNF428Q96B54 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
ZNF428Q96B54 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ZNF428Q96B54 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC24.61■■□□□ 1.53
ZNF428Q96B54 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC24.61■■□□□ 1.53
ZNF428Q96B54 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
ZNF428Q96B54 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
ZNF428Q96B54 ECEL1P2-202ENST00000465689 757 ntBASIC24.61■■□□□ 1.53
ZNF428Q96B54 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC24.61■■□□□ 1.53
ZNF428Q96B54 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
ZNF428Q96B54 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC24.61■■□□□ 1.53
ZNF428Q96B54 TMA16-209ENST00000513272 803 ntTSL 2 BASIC24.61■■□□□ 1.53
ZNF428Q96B54 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
ZNF428Q96B54 DGCR10-201ENST00000609839 495 ntBASIC24.61■■□□□ 1.53
ZNF428Q96B54 GLDC-219ENST00000640208 420 ntTSL 2 BASIC24.61■■□□□ 1.53
ZNF428Q96B54 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ZNF428Q96B54 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ZNF428Q96B54 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC24.61■■□□□ 1.53
ZNF428Q96B54 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
ZNF428Q96B54 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC24.61■■□□□ 1.53
ZNF428Q96B54 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
ZNF428Q96B54 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
ZNF428Q96B54 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
ZNF428Q96B54 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ZNF428Q96B54 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC24.6■■□□□ 1.53
ZNF428Q96B54 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC24.6■■□□□ 1.53
ZNF428Q96B54 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC24.6■■□□□ 1.53
ZNF428Q96B54 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
ZNF428Q96B54 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ZNF428Q96B54 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
ZNF428Q96B54 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
ZNF428Q96B54 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ZNF428Q96B54 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
ZNF428Q96B54 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC24.6■■□□□ 1.53
ZNF428Q96B54 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC24.6■■□□□ 1.53
ZNF428Q96B54 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
ZNF428Q96B54 AC005363.2-201ENST00000618631 242 ntBASIC24.6■■□□□ 1.53
ZNF428Q96B54 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ZNF428Q96B54 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ZNF428Q96B54 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ZNF428Q96B54 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
ZNF428Q96B54 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
ZNF428Q96B54 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC24.6■■□□□ 1.53
ZNF428Q96B54 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC24.6■■□□□ 1.53
ZNF428Q96B54 BX323043.1-201ENST00000641006 1765 ntBASIC24.59■■□□□ 1.53
ZNF428Q96B54 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ZNF428Q96B54 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC24.59■■□□□ 1.53
ZNF428Q96B54 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms