Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.96■■□□□ 1.11
SH3RF1Q7Z6J0 KRT126P-201ENST00000549467 1181 ntBASIC21.96■■□□□ 1.11
SH3RF1Q7Z6J0 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.96■■□□□ 1.11
SH3RF1Q7Z6J0 FAM87A-204ENST00000613235 858 ntBASIC21.96■■□□□ 1.11
SH3RF1Q7Z6J0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.96■■□□□ 1.11
SH3RF1Q7Z6J0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SH3RF1Q7Z6J0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.96■■□□□ 1.11
SH3RF1Q7Z6J0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SH3RF1Q7Z6J0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SH3RF1Q7Z6J0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SH3RF1Q7Z6J0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SH3RF1Q7Z6J0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SH3RF1Q7Z6J0 FSCN1P1-201ENST00000568912 1481 ntBASIC21.96■■□□□ 1.11
SH3RF1Q7Z6J0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.96■■□□□ 1.11
SH3RF1Q7Z6J0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SH3RF1Q7Z6J0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
SH3RF1Q7Z6J0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SH3RF1Q7Z6J0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
SH3RF1Q7Z6J0 AP000974.1-201ENST00000623909 2387 ntBASIC21.95■■□□□ 1.1
SH3RF1Q7Z6J0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SH3RF1Q7Z6J0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SH3RF1Q7Z6J0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SH3RF1Q7Z6J0 AP005242.2-201ENST00000580065 1175 ntBASIC21.95■■□□□ 1.1
SH3RF1Q7Z6J0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SH3RF1Q7Z6J0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.95■■□□□ 1.1
SH3RF1Q7Z6J0 MYC-208ENST00000641036 567 ntBASIC21.95■■□□□ 1.1
SH3RF1Q7Z6J0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SH3RF1Q7Z6J0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.95■■□□□ 1.1
SH3RF1Q7Z6J0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.95■■□□□ 1.1
SH3RF1Q7Z6J0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SH3RF1Q7Z6J0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.95■■□□□ 1.1
SH3RF1Q7Z6J0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF1Q7Z6J0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF1Q7Z6J0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.94■■□□□ 1.1
SH3RF1Q7Z6J0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF1Q7Z6J0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.94■■□□□ 1.1
SH3RF1Q7Z6J0 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
SH3RF1Q7Z6J0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF1Q7Z6J0 AL031133.1-201ENST00000406807 723 ntBASIC21.94■■□□□ 1.1
SH3RF1Q7Z6J0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.94■■□□□ 1.1
SH3RF1Q7Z6J0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.94■■□□□ 1.1
SH3RF1Q7Z6J0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF1Q7Z6J0 AC011506.1-201ENST00000474329 610 ntBASIC21.94■■□□□ 1.1
SH3RF1Q7Z6J0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF1Q7Z6J0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF1Q7Z6J0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF1Q7Z6J0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF1Q7Z6J0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF1Q7Z6J0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF1Q7Z6J0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF1Q7Z6J0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF1Q7Z6J0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3RF1Q7Z6J0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.94■■□□□ 1.1
SH3RF1Q7Z6J0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SH3RF1Q7Z6J0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
SH3RF1Q7Z6J0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SH3RF1Q7Z6J0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SH3RF1Q7Z6J0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SH3RF1Q7Z6J0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SH3RF1Q7Z6J0 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.93■■□□□ 1.1
SH3RF1Q7Z6J0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SH3RF1Q7Z6J0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
SH3RF1Q7Z6J0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.93■■□□□ 1.1
SH3RF1Q7Z6J0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
SH3RF1Q7Z6J0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.93■■□□□ 1.1
SH3RF1Q7Z6J0 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.93■■□□□ 1.1
SH3RF1Q7Z6J0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SH3RF1Q7Z6J0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SH3RF1Q7Z6J0 B3GAT3P1-201ENST00000471720 806 ntBASIC21.93■■□□□ 1.1
SH3RF1Q7Z6J0 AC091390.4-202ENST00000476426 537 ntBASIC21.93■■□□□ 1.1
SH3RF1Q7Z6J0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
SH3RF1Q7Z6J0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.93■■□□□ 1.1
SH3RF1Q7Z6J0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.93■■□□□ 1.1
SH3RF1Q7Z6J0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
SH3RF1Q7Z6J0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.93■■□□□ 1.1
SH3RF1Q7Z6J0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF1Q7Z6J0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.92■■□□□ 1.1
SH3RF1Q7Z6J0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF1Q7Z6J0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF1Q7Z6J0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF1Q7Z6J0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF1Q7Z6J0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.92■■□□□ 1.1
SH3RF1Q7Z6J0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF1Q7Z6J0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.92■■□□□ 1.1
SH3RF1Q7Z6J0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF1Q7Z6J0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.92■■□□□ 1.1
SH3RF1Q7Z6J0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.92■■□□□ 1.1
SH3RF1Q7Z6J0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF1Q7Z6J0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
SH3RF1Q7Z6J0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.92■■□□□ 1.1
SH3RF1Q7Z6J0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
SH3RF1Q7Z6J0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF1Q7Z6J0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH3RF1Q7Z6J0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.92■■□□□ 1.1
SH3RF1Q7Z6J0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
SH3RF1Q7Z6J0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SH3RF1Q7Z6J0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3RF1Q7Z6J0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SH3RF1Q7Z6J0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3RF1Q7Z6J0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms