Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CSMD2Q7Z408 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD2Q7Z408 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.17■□□□□ 0.18
CSMD2Q7Z408 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD2Q7Z408 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD2Q7Z408 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
CSMD2Q7Z408 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD2Q7Z408 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD2Q7Z408 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD2Q7Z408 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.17■□□□□ 0.18
CSMD2Q7Z408 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.17■□□□□ 0.18
CSMD2Q7Z408 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.17■□□□□ 0.18
CSMD2Q7Z408 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.17■□□□□ 0.18
CSMD2Q7Z408 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD2Q7Z408 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.17■□□□□ 0.18
CSMD2Q7Z408 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD2Q7Z408 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD2Q7Z408 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CSMD2Q7Z408 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CSMD2Q7Z408 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.17■□□□□ 0.18
CSMD2Q7Z408 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.17■□□□□ 0.18
CSMD2Q7Z408 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.17■□□□□ 0.18
CSMD2Q7Z408 AF238378.1-201ENST00000526806 358 ntBASIC16.17■□□□□ 0.18
CSMD2Q7Z408 AL121772.3-201ENST00000610840 674 ntBASIC16.17■□□□□ 0.18
CSMD2Q7Z408 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.16■□□□□ 0.18
CSMD2Q7Z408 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD2Q7Z408 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD2Q7Z408 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD2Q7Z408 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD2Q7Z408 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD2Q7Z408 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD2Q7Z408 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CSMD2Q7Z408 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD2Q7Z408 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.16■□□□□ 0.18
CSMD2Q7Z408 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.16■□□□□ 0.18
CSMD2Q7Z408 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD2Q7Z408 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CSMD2Q7Z408 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.16■□□□□ 0.18
CSMD2Q7Z408 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD2Q7Z408 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD2Q7Z408 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD2Q7Z408 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD2Q7Z408 LINC00265-3P-201ENST00000447588 903 ntBASIC16.16■□□□□ 0.18
CSMD2Q7Z408 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD2Q7Z408 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.16■□□□□ 0.18
CSMD2Q7Z408 AL773604.1-201ENST00000617417 272 ntBASIC16.16■□□□□ 0.18
CSMD2Q7Z408 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD2Q7Z408 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.16■□□□□ 0.18
CSMD2Q7Z408 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 AC106730.1-201ENST00000566722 1090 ntBASIC16.15■□□□□ 0.18
CSMD2Q7Z408 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 AL117328.2-201ENST00000624617 1940 ntBASIC16.15■□□□□ 0.18
CSMD2Q7Z408 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CSMD2Q7Z408 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CSMD2Q7Z408 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.14■□□□□ 0.17
CSMD2Q7Z408 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CSMD2Q7Z408 AC093525.10-201ENST00000625130 1569 ntBASIC16.14■□□□□ 0.17
CSMD2Q7Z408 GPAT2P1-201ENST00000444924 1672 ntBASIC16.14■□□□□ 0.17
CSMD2Q7Z408 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSMD2Q7Z408 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.14■□□□□ 0.17
CSMD2Q7Z408 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.14■□□□□ 0.17
CSMD2Q7Z408 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CSMD2Q7Z408 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.14■□□□□ 0.17
CSMD2Q7Z408 AC079602.3-201ENST00000623931 403 ntBASIC16.14■□□□□ 0.17
CSMD2Q7Z408 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSMD2Q7Z408 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.14■□□□□ 0.17
CSMD2Q7Z408 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CSMD2Q7Z408 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CSMD2Q7Z408 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.14■□□□□ 0.17
CSMD2Q7Z408 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSMD2Q7Z408 AL049796.1-201ENST00000565336 1766 ntBASIC16.14■□□□□ 0.17
CSMD2Q7Z408 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSMD2Q7Z408 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSMD2Q7Z408 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSMD2Q7Z408 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CSMD2Q7Z408 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.14■□□□□ 0.17
CSMD2Q7Z408 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms