Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 SLC26A6-201ENST00000307364 2586 ntTSL 1 (best)10.02□□□□□ -0.814e-8■■□□□ 12.3
SRSF1Q07955 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.68■□□□□ 0.424e-8■■□□□ 12.3
SRSF1Q07955 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.7□□□□□ -0.064e-8■■□□□ 12.3
SRSF1Q07955 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.69□□□□□ -0.224e-8■■□□□ 12.3
SRSF1Q07955 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC11.27□□□□□ -0.614e-8■■□□□ 12.3
SRSF1Q07955 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC6.9□□□□□ -1.314e-8■■□□□ 12.3
SRSF1Q07955 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.11□□□□□ -1.914e-8■■□□□ 12.3
SRSF1Q07955 EXOC3L4-207ENST00000560925 2341 ntTSL 218.02■□□□□ 0.481e-6■■□□□ 12.3
SRSF1Q07955 TBRG1-205ENST00000473629 1634 ntTSL 516.81■□□□□ 0.286e-7■■□□□ 12.3
SRSF1Q07955 TBRG1-208ENST00000530731 1571 ntTSL 1 (best)15.37■□□□□ 0.056e-7■■□□□ 12.3
SRSF1Q07955 TBRG1-210ENST00000531667 552 ntTSL 413.94□□□□□ -0.186e-7■■□□□ 12.3
SRSF1Q07955 TBRG1-207ENST00000529543 2142 ntTSL 1 (best)13.56□□□□□ -0.246e-7■■□□□ 12.3
SRSF1Q07955 TBRG1-204ENST00000452080 730 ntTSL 313.17□□□□□ -0.36e-7■■□□□ 12.3
SRSF1Q07955 TBRG1-201ENST00000284290 4468 ntTSL 1 (best)8.99□□□□□ -0.976e-7■■□□□ 12.3
SRSF1Q07955 TBRG1-203ENST00000441174 4004 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.16e-7■■□□□ 12.3
SRSF1Q07955 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.649e-8■■□□□ 12.3
SRSF1Q07955 DGCR8-202ENST00000383024 4419 ntTSL 5 BASIC9.53□□□□□ -0.889e-8■■□□□ 12.3
SRSF1Q07955 CDC37-210ENST00000593124 1389 ntTSL 517.98■□□□□ 0.473e-16■■□□□ 12.3
SRSF1Q07955 CDC37-203ENST00000588869 966 ntTSL 516.27■□□□□ 0.23e-16■■□□□ 12.3
SRSF1Q07955 CDC37-209ENST00000591248 1377 ntTSL 514.29□□□□□ -0.123e-16■■□□□ 12.3
SRSF1Q07955 CDC37-206ENST00000589629 728 ntTSL 313.55□□□□□ -0.243e-16■■□□□ 12.3
SRSF1Q07955 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.433e-16■■□□□ 12.3
SRSF1Q07955 RNF31-203ENST00000491351 1804 ntTSL 520.3■□□□□ 0.848e-10■■□□□ 12.2
SRSF1Q07955 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.358e-10■■□□□ 12.2
SRSF1Q07955 RNF31-211ENST00000559275 3198 ntTSL 1 (best) BASIC8.1□□□□□ -1.118e-10■■□□□ 12.2
SRSF1Q07955 HSP90B1-208ENST00000551983 728 ntTSL 25.4□□□□□ -1.545e-14■■□□□ 12.2
SRSF1Q07955 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.59■□□□□ 0.572e-10■■□□□ 12.2
SRSF1Q07955 C20orf204-202ENST00000431158 2954 ntTSL 1 (best)12.95□□□□□ -0.342e-10■■□□□ 12.2
SRSF1Q07955 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.13□□□□□ -0.312e-8■■□□□ 12.2
SRSF1Q07955 WDR6-207ENST00000448293 3377 ntTSL 2 BASIC9.4□□□□□ -0.92e-8■■□□□ 12.2
SRSF1Q07955 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.472e-11■■□□□ 12.2
SRSF1Q07955 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.272e-11■■□□□ 12.2
SRSF1Q07955 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.82■□□□□ 0.122e-11■■□□□ 12.2
SRSF1Q07955 AKR1A1-212ENST00000496999 775 ntTSL 215.82■□□□□ 0.122e-11■■□□□ 12.2
SRSF1Q07955 AKR1A1-208ENST00000476957 910 ntTSL 315.68■□□□□ 0.12e-11■■□□□ 12.2
SRSF1Q07955 AKR1A1-209ENST00000481885 516 ntTSL 315.58■□□□□ 0.082e-11■■□□□ 12.2
SRSF1Q07955 AKR1A1-203ENST00000434299 840 ntTSL 213.53□□□□□ -0.242e-11■■□□□ 12.2
SRSF1Q07955 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.32e-11■■□□□ 12.2
SRSF1Q07955 AKR1A1-213ENST00000497973 667 ntTSL 210.36□□□□□ -0.752e-11■■□□□ 12.2
SRSF1Q07955 PPP1R35-205ENST00000491407 942 ntTSL 527.15■■□□□ 1.941e-8■■□□□ 12.2
SRSF1Q07955 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.751e-8■■□□□ 12.2
SRSF1Q07955 PPP1R35-204ENST00000487452 965 ntTSL 225.34■■□□□ 1.651e-8■■□□□ 12.2
SRSF1Q07955 TANGO2-222ENST00000479679 894 ntTSL 221.97■■□□□ 1.111e-8■■□□□ 12.2
SRSF1Q07955 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.76■□□□□ 0.751e-8■■□□□ 12.2
SRSF1Q07955 ATG16L2-212ENST00000538973 1456 ntTSL 519.44■□□□□ 0.71e-8■■□□□ 12.2
SRSF1Q07955 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.521e-8■■□□□ 12.2
SRSF1Q07955 MUS81-207ENST00000529374 1232 ntTSL 517.55■□□□□ 0.41e-8■■□□□ 12.2
SRSF1Q07955 MUS81-211ENST00000530111 692 ntTSL 316.72■□□□□ 0.271e-8■■□□□ 12.2
SRSF1Q07955 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.59■□□□□ 0.251e-8■■□□□ 12.2
SRSF1Q07955 ATG16L2-202ENST00000435507 2254 ntTSL 216.4■□□□□ 0.221e-8■■□□□ 12.2
SRSF1Q07955 ATG16L2-206ENST00000535830 963 ntTSL 216.35■□□□□ 0.211e-8■■□□□ 12.2
SRSF1Q07955 MUS81-213ENST00000530928 1793 ntTSL 215.82■□□□□ 0.121e-8■■□□□ 12.2
SRSF1Q07955 MUS81-204ENST00000525147 482 ntTSL 515.51■□□□□ 0.071e-8■■□□□ 12.2
SRSF1Q07955 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.031e-8■■□□□ 12.2
SRSF1Q07955 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.18■□□□□ 0.029e-10■■□□□ 12.2
SRSF1Q07955 MUS81-202ENST00000524647 1817 ntTSL 514.96□□□□□ -0.011e-8■■□□□ 12.2
SRSF1Q07955 ATG16L2-215ENST00000541367 1575 ntTSL 513.92□□□□□ -0.181e-8■■□□□ 12.2
SRSF1Q07955 ATG16L2-207ENST00000536995 4577 ntTSL 213.71□□□□□ -0.211e-8■■□□□ 12.2
SRSF1Q07955 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC13.64□□□□□ -0.231e-8■■□□□ 12.2
SRSF1Q07955 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.39□□□□□ -0.279e-10■■□□□ 12.2
SRSF1Q07955 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.39e-10■■□□□ 12.2
SRSF1Q07955 DCAF6-208ENST00000470721 2803 ntTSL 212.9□□□□□ -0.341e-8■■□□□ 12.2
SRSF1Q07955 ATG16L2-210ENST00000537837 784 ntTSL 512.71□□□□□ -0.371e-8■■□□□ 12.2
SRSF1Q07955 UCKL1-207ENST00000632800 1530 ntTSL 512.68□□□□□ -0.389e-10■■□□□ 12.2
SRSF1Q07955 ATG16L2-213ENST00000540222 1400 ntTSL 512.63□□□□□ -0.391e-8■■□□□ 12.2
SRSF1Q07955 ATG16L2-216ENST00000541554 295 ntTSL 312.22□□□□□ -0.451e-8■■□□□ 12.2
SRSF1Q07955 DNAJC11-205ENST00000460594 581 ntTSL 312.09□□□□□ -0.471e-8■■□□□ 12.2
SRSF1Q07955 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.491e-8■■□□□ 12.2
SRSF1Q07955 ATG16L2-220ENST00000544490 3731 ntTSL 211.67□□□□□ -0.541e-8■■□□□ 12.2
SRSF1Q07955 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.581e-8■■□□□ 12.2
SRSF1Q07955 TANGO2-209ENST00000432198 585 ntTSL 411.43□□□□□ -0.581e-8■■□□□ 12.2
SRSF1Q07955 DNAJC11-210ENST00000473993 755 ntTSL 511.43□□□□□ -0.581e-8■■□□□ 12.2
SRSF1Q07955 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.671e-8■■□□□ 12.2
SRSF1Q07955 ATG16L2-203ENST00000439504 3841 ntTSL 1 (best)10.57□□□□□ -0.721e-8■■□□□ 12.2
SRSF1Q07955 DNAJC11-207ENST00000465911 745 ntTSL 210.49□□□□□ -0.731e-8■■□□□ 12.2
SRSF1Q07955 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.761e-8■■□□□ 12.2
SRSF1Q07955 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.871e-8■■□□□ 12.2
SRSF1Q07955 DCAF6-204ENST00000432587 3522 ntTSL 2 BASIC9.48□□□□□ -0.891e-8■■□□□ 12.2
SRSF1Q07955 MUS81-214ENST00000531905 3420 ntTSL 58.84□□□□□ -0.991e-8■■□□□ 12.2
SRSF1Q07955 DNAJC11-211ENST00000485073 613 ntTSL 27.89□□□□□ -1.151e-8■■□□□ 12.2
SRSF1Q07955 POM121-204ENST00000446813 3456 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.191e-8■■□□□ 12.2
SRSF1Q07955 DNAJC11-203ENST00000426784 975 ntTSL 36.63□□□□□ -1.351e-8■■□□□ 12.2
SRSF1Q07955 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.361e-8■■□□□ 12.2
SRSF1Q07955 PRODH2-202ENST00000587695 1956 ntTSL 213.91□□□□□ -0.186e-7■■□□□ 12.2
SRSF1Q07955 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.366e-7■■□□□ 12.2
SRSF1Q07955 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.722e-8■■□□□ 12.2
SRSF1Q07955 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.532e-8■■□□□ 12.2
SRSF1Q07955 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.512e-8■■□□□ 12.2
SRSF1Q07955 RARRES2-204ENST00000478771 1907 ntTSL 216.13■□□□□ 0.172e-8■■□□□ 12.2
SRSF1Q07955 RARRES2-203ENST00000467793 583 ntTSL 315.59■□□□□ 0.092e-8■■□□□ 12.2
SRSF1Q07955 SLC25A37-212ENST00000523930 823 ntTSL 513.26□□□□□ -0.298e-9■■□□□ 12.2
SRSF1Q07955 CAMTA1-213ENST00000490738 538 ntTSL 226.57■■□□□ 1.848e-7■■□□□ 12.2
SRSF1Q07955 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.99■□□□□ 0.958e-7■■□□□ 12.2
SRSF1Q07955 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.78■□□□□ 0.768e-7■■□□□ 12.2
SRSF1Q07955 CAMTA1-209ENST00000476163 863 ntTSL 218.48■□□□□ 0.558e-7■■□□□ 12.2
SRSF1Q07955 BHLHE40-203ENST00000467610 1366 ntTSL 215.92■□□□□ 0.148e-7■■□□□ 12.2
SRSF1Q07955 POFUT2-205ENST00000460932 616 ntTSL 215.35■□□□□ 0.058e-7■■□□□ 12.2
SRSF1Q07955 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.73□□□□□ -0.058e-7■■□□□ 12.2
SRSF1Q07955 POFUT2-206ENST00000463917 441 ntTSL 313.26□□□□□ -0.298e-7■■□□□ 12.2
SRSF1Q07955 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.38e-7■■□□□ 12.2
Retrieved 100 of 14,836 protein–RNA pairs in 70.5 ms