Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCS1Q01581 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
HMGCS1Q01581 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.45■□□□□ 0.54
HMGCS1Q01581 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCS1Q01581 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.45■□□□□ 0.54
HMGCS1Q01581 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCS1Q01581 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCS1Q01581 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
HMGCS1Q01581 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.45■□□□□ 0.54
HMGCS1Q01581 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.45■□□□□ 0.54
HMGCS1Q01581 AP003097.1-201ENST00000530657 1135 ntBASIC18.45■□□□□ 0.54
HMGCS1Q01581 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCS1Q01581 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.45■□□□□ 0.54
HMGCS1Q01581 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.45■□□□□ 0.54
HMGCS1Q01581 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.45■□□□□ 0.54
HMGCS1Q01581 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCS1Q01581 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.45■□□□□ 0.54
HMGCS1Q01581 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCS1Q01581 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.45■□□□□ 0.54
HMGCS1Q01581 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCS1Q01581 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCS1Q01581 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCS1Q01581 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HMGCS1Q01581 NBPF21P-201ENST00000425093 1451 ntBASIC18.45■□□□□ 0.54
HMGCS1Q01581 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.45■□□□□ 0.54
HMGCS1Q01581 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCS1Q01581 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCS1Q01581 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCS1Q01581 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCS1Q01581 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCS1Q01581 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.44■□□□□ 0.54
HMGCS1Q01581 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
HMGCS1Q01581 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.44■□□□□ 0.54
HMGCS1Q01581 AL138781.2-201ENST00000617896 1843 ntBASIC18.44■□□□□ 0.54
HMGCS1Q01581 NEFHP1-201ENST00000412845 2629 ntBASIC18.44■□□□□ 0.54
HMGCS1Q01581 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCS1Q01581 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
HMGCS1Q01581 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCS1Q01581 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
HMGCS1Q01581 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
HMGCS1Q01581 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCS1Q01581 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCS1Q01581 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
HMGCS1Q01581 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCS1Q01581 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCS1Q01581 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCS1Q01581 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.44■□□□□ 0.54
HMGCS1Q01581 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCS1Q01581 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
HMGCS1Q01581 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCS1Q01581 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.44■□□□□ 0.54
HMGCS1Q01581 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.44■□□□□ 0.54
HMGCS1Q01581 CD99P1-205ENST00000527459 561 ntBASIC18.44■□□□□ 0.54
HMGCS1Q01581 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.44■□□□□ 0.54
HMGCS1Q01581 AC233263.1-201ENST00000578059 224 ntBASIC18.44■□□□□ 0.54
HMGCS1Q01581 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCS1Q01581 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
HMGCS1Q01581 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCS1Q01581 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCS1Q01581 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCS1Q01581 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.44■□□□□ 0.54
HMGCS1Q01581 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
HMGCS1Q01581 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCS1Q01581 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCS1Q01581 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
HMGCS1Q01581 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.44■□□□□ 0.54
HMGCS1Q01581 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCS1Q01581 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS1Q01581 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS1Q01581 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS1Q01581 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS1Q01581 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS1Q01581 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS1Q01581 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.43■□□□□ 0.54
HMGCS1Q01581 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS1Q01581 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
HMGCS1Q01581 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS1Q01581 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS1Q01581 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS1Q01581 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
HMGCS1Q01581 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS1Q01581 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
HMGCS1Q01581 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS1Q01581 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.43■□□□□ 0.54
HMGCS1Q01581 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS1Q01581 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS1Q01581 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.43■□□□□ 0.54
HMGCS1Q01581 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.43■□□□□ 0.54
HMGCS1Q01581 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
HMGCS1Q01581 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS1Q01581 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS1Q01581 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.42■□□□□ 0.54
HMGCS1Q01581 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCS1Q01581 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.42■□□□□ 0.54
HMGCS1Q01581 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCS1Q01581 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCS1Q01581 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCS1Q01581 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.42■□□□□ 0.54
HMGCS1Q01581 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCS1Q01581 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms