Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC24.32■■□□□ 1.48
COL15A1P39059 CR769767.2-201ENST00000622735 460 ntBASIC24.32■■□□□ 1.48
COL15A1P39059 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC24.32■■□□□ 1.48
COL15A1P39059 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC24.32■■□□□ 1.48
COL15A1P39059 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL15A1P39059 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC24.32■■□□□ 1.48
COL15A1P39059 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL15A1P39059 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
COL15A1P39059 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
COL15A1P39059 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL15A1P39059 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL15A1P39059 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC24.32■■□□□ 1.48
COL15A1P39059 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC24.32■■□□□ 1.48
COL15A1P39059 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC24.31■■□□□ 1.48
COL15A1P39059 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
COL15A1P39059 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC24.31■■□□□ 1.48
COL15A1P39059 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
COL15A1P39059 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
COL15A1P39059 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
COL15A1P39059 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC24.31■■□□□ 1.48
COL15A1P39059 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
COL15A1P39059 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC24.31■■□□□ 1.48
COL15A1P39059 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
COL15A1P39059 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
COL15A1P39059 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
COL15A1P39059 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
COL15A1P39059 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
COL15A1P39059 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC24.31■■□□□ 1.48
COL15A1P39059 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
COL15A1P39059 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
COL15A1P39059 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
COL15A1P39059 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
COL15A1P39059 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC24.3■■□□□ 1.48
COL15A1P39059 NPAP1P7-201ENST00000613027 823 ntBASIC24.3■■□□□ 1.48
COL15A1P39059 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
COL15A1P39059 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
COL15A1P39059 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
COL15A1P39059 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
COL15A1P39059 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC24.3■■□□□ 1.48
COL15A1P39059 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC24.3■■□□□ 1.48
COL15A1P39059 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC24.3■■□□□ 1.48
COL15A1P39059 LBX2-AS1-202ENST00000603175 2083 ntBASIC24.3■■□□□ 1.48
COL15A1P39059 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
COL15A1P39059 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
COL15A1P39059 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC24.3■■□□□ 1.48
COL15A1P39059 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC24.3■■□□□ 1.48
COL15A1P39059 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
COL15A1P39059 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
COL15A1P39059 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC24.3■■□□□ 1.48
COL15A1P39059 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
COL15A1P39059 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
COL15A1P39059 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
COL15A1P39059 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC24.3■■□□□ 1.48
COL15A1P39059 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC24.29■■□□□ 1.48
COL15A1P39059 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC24.29■■□□□ 1.48
COL15A1P39059 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC24.29■■□□□ 1.48
COL15A1P39059 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
COL15A1P39059 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC24.29■■□□□ 1.48
COL15A1P39059 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
COL15A1P39059 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC24.29■■□□□ 1.48
COL15A1P39059 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
COL15A1P39059 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
COL15A1P39059 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
COL15A1P39059 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
COL15A1P39059 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC24.29■■□□□ 1.48
COL15A1P39059 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
COL15A1P39059 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC24.29■■□□□ 1.48
COL15A1P39059 HBZP1-201ENST00000354915 429 ntBASIC24.29■■□□□ 1.48
COL15A1P39059 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC24.29■■□□□ 1.48
COL15A1P39059 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
COL15A1P39059 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC24.29■■□□□ 1.48
COL15A1P39059 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC24.29■■□□□ 1.48
COL15A1P39059 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC24.29■■□□□ 1.48
COL15A1P39059 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC24.29■■□□□ 1.48
COL15A1P39059 VPS72-207ENST00000640458 689 ntTSL 5 BASIC24.29■■□□□ 1.48
COL15A1P39059 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC24.28■■□□□ 1.48
COL15A1P39059 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
COL15A1P39059 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
COL15A1P39059 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
COL15A1P39059 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
COL15A1P39059 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
COL15A1P39059 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC24.28■■□□□ 1.48
COL15A1P39059 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
COL15A1P39059 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
COL15A1P39059 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC24.28■■□□□ 1.48
COL15A1P39059 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
COL15A1P39059 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
COL15A1P39059 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC24.28■■□□□ 1.48
COL15A1P39059 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC24.28■■□□□ 1.48
COL15A1P39059 BCL10-202ENST00000620248 774 ntTSL 5 BASIC24.28■■□□□ 1.48
COL15A1P39059 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC24.27■■□□□ 1.48
COL15A1P39059 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
COL15A1P39059 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
COL15A1P39059 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
COL15A1P39059 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
COL15A1P39059 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC24.27■■□□□ 1.48
COL15A1P39059 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC24.27■■□□□ 1.48
COL15A1P39059 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
COL15A1P39059 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC24.27■■□□□ 1.48
COL15A1P39059 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms