Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC11.97□□□□□ -0.49
APOBP04114 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC11.97□□□□□ -0.49
APOBP04114 PENK-208ENST00000523051 772 ntTSL 5 BASIC11.97□□□□□ -0.49
APOBP04114 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC11.97□□□□□ -0.49
APOBP04114 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC11.97□□□□□ -0.49
APOBP04114 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC11.97□□□□□ -0.49
APOBP04114 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC11.97□□□□□ -0.49
APOBP04114 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
APOBP04114 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC11.97□□□□□ -0.49
APOBP04114 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOBP04114 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC11.97□□□□□ -0.49
APOBP04114 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC11.97□□□□□ -0.49
APOBP04114 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC11.97□□□□□ -0.49
APOBP04114 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
APOBP04114 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
APOBP04114 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOBP04114 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
APOBP04114 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOBP04114 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOBP04114 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
APOBP04114 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOBP04114 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOBP04114 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOBP04114 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOBP04114 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC11.97□□□□□ -0.49
APOBP04114 AC138894.3-201ENST00000603787 634 ntBASIC11.97□□□□□ -0.49
APOBP04114 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOBP04114 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
APOBP04114 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC11.96□□□□□ -0.49
APOBP04114 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC11.96□□□□□ -0.49
APOBP04114 BMF-207ENST00000559701 630 ntTSL 3 BASIC11.96□□□□□ -0.49
APOBP04114 AC012615.1-201ENST00000565797 1299 ntBASIC11.96□□□□□ -0.49
APOBP04114 RNF126P1-202ENST00000569893 925 ntBASIC11.96□□□□□ -0.49
APOBP04114 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
APOBP04114 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
APOBP04114 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
APOBP04114 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
APOBP04114 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
APOBP04114 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
APOBP04114 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC11.96□□□□□ -0.49
APOBP04114 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
APOBP04114 AC104417.2-201ENST00000562989 1793 ntBASIC11.96□□□□□ -0.49
APOBP04114 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
APOBP04114 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
APOBP04114 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
APOBP04114 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC11.96□□□□□ -0.5
APOBP04114 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC11.96□□□□□ -0.5
APOBP04114 AC106730.1-201ENST00000566722 1090 ntBASIC11.96□□□□□ -0.5
APOBP04114 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
APOBP04114 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
APOBP04114 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC11.96□□□□□ -0.5
APOBP04114 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
APOBP04114 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
APOBP04114 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.5
APOBP04114 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
APOBP04114 AL590627.1-203ENST00000421194 1026 ntBASIC11.96□□□□□ -0.5
APOBP04114 BX842568.4-201ENST00000421222 227 ntBASIC11.96□□□□□ -0.5
APOBP04114 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC11.96□□□□□ -0.5
APOBP04114 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
APOBP04114 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
APOBP04114 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOBP04114 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOBP04114 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOBP04114 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOBP04114 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOBP04114 AL023284.2-201ENST00000405850 579 ntBASIC11.95□□□□□ -0.5
APOBP04114 KRT18P67-201ENST00000432816 1264 ntBASIC11.95□□□□□ -0.5
APOBP04114 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
APOBP04114 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC11.95□□□□□ -0.5
APOBP04114 ABR-204ENST00000543210 1049 ntTSL 2 BASIC11.95□□□□□ -0.5
APOBP04114 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC11.95□□□□□ -0.5
APOBP04114 PIN1-206ENST00000587625 878 ntTSL 2 BASIC11.95□□□□□ -0.5
APOBP04114 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
APOBP04114 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOBP04114 AL136038.4-201ENST00000603606 1261 ntBASIC11.95□□□□□ -0.5
APOBP04114 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
APOBP04114 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC11.95□□□□□ -0.5
APOBP04114 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
APOBP04114 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOBP04114 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC11.95□□□□□ -0.5
APOBP04114 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
APOBP04114 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOBP04114 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOBP04114 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
APOBP04114 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
APOBP04114 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOBP04114 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
APOBP04114 SAPCD2P3-201ENST00000455031 850 ntBASIC11.95□□□□□ -0.5
APOBP04114 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC11.95□□□□□ -0.5
APOBP04114 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC11.95□□□□□ -0.5
APOBP04114 LITAF-220ENST00000620789 692 ntTSL 5 BASIC11.95□□□□□ -0.5
APOBP04114 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC11.95□□□□□ -0.5
APOBP04114 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOBP04114 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
APOBP04114 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOBP04114 BAALC-202ENST00000306391 243 ntTSL 5 BASIC11.94□□□□□ -0.5
APOBP04114 BAALC-204ENST00000330955 222 ntTSL 5 BASIC11.94□□□□□ -0.5
APOBP04114 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC11.94□□□□□ -0.5
APOBP04114 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOBP04114 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms