Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 KRT18P58-201ENST00000527480 1120 ntBASIC19.27■□□□□ 0.68
PDGFBP01127 LINC02084-201ENST00000606069 1096 ntBASIC19.27■□□□□ 0.68
PDGFBP01127 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDGFBP01127 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PDGFBP01127 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PDGFBP01127 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PDGFBP01127 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDGFBP01127 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDGFBP01127 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDGFBP01127 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDGFBP01127 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDGFBP01127 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
PDGFBP01127 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
PDGFBP01127 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDGFBP01127 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDGFBP01127 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
PDGFBP01127 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDGFBP01127 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.26■□□□□ 0.67
PDGFBP01127 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.26■□□□□ 0.67
PDGFBP01127 AF238378.1-201ENST00000526806 358 ntBASIC19.26■□□□□ 0.67
PDGFBP01127 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.26■□□□□ 0.67
PDGFBP01127 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDGFBP01127 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDGFBP01127 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.26■□□□□ 0.67
PDGFBP01127 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PDGFBP01127 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDGFBP01127 AC006128.1-201ENST00000624704 1661 ntBASIC19.26■□□□□ 0.67
PDGFBP01127 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PDGFBP01127 Z83836.1-201ENST00000624605 1642 ntBASIC19.25■□□□□ 0.67
PDGFBP01127 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.25■□□□□ 0.67
PDGFBP01127 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PDGFBP01127 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.25■□□□□ 0.67
PDGFBP01127 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFBP01127 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFBP01127 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PDGFBP01127 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFBP01127 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFBP01127 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.25■□□□□ 0.67
PDGFBP01127 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFBP01127 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFBP01127 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFBP01127 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.25■□□□□ 0.67
PDGFBP01127 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.25■□□□□ 0.67
PDGFBP01127 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.25■□□□□ 0.67
PDGFBP01127 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.25■□□□□ 0.67
PDGFBP01127 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.25■□□□□ 0.67
PDGFBP01127 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFBP01127 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFBP01127 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PDGFBP01127 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFBP01127 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFBP01127 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.25■□□□□ 0.67
PDGFBP01127 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
PDGFBP01127 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFBP01127 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFBP01127 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFBP01127 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFBP01127 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
PDGFBP01127 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
PDGFBP01127 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.24■□□□□ 0.67
PDGFBP01127 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFBP01127 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFBP01127 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.24■□□□□ 0.67
PDGFBP01127 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.24■□□□□ 0.67
PDGFBP01127 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
PDGFBP01127 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFBP01127 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.24■□□□□ 0.67
PDGFBP01127 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFBP01127 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDGFBP01127 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDGFBP01127 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.23■□□□□ 0.67
PDGFBP01127 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.23■□□□□ 0.67
PDGFBP01127 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
PDGFBP01127 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDGFBP01127 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDGFBP01127 AC233702.3-201ENST00000578656 1387 ntBASIC19.23■□□□□ 0.67
PDGFBP01127 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDGFBP01127 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDGFBP01127 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDGFBP01127 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDGFBP01127 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.23■□□□□ 0.67
PDGFBP01127 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDGFBP01127 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.23■□□□□ 0.67
PDGFBP01127 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDGFBP01127 MIR940-201ENST00000401276 94 ntBASIC19.23■□□□□ 0.67
PDGFBP01127 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.23■□□□□ 0.67
PDGFBP01127 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.23■□□□□ 0.67
PDGFBP01127 SAPCD2P3-201ENST00000455031 850 ntBASIC19.23■□□□□ 0.67
PDGFBP01127 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.23■□□□□ 0.67
PDGFBP01127 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.23■□□□□ 0.67
PDGFBP01127 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PDGFBP01127 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PDGFBP01127 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDGFBP01127 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDGFBP01127 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.23■□□□□ 0.67
PDGFBP01127 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
PDGFBP01127 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PDGFBP01127 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.23■□□□□ 0.67
PDGFBP01127 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFBP01127 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms