Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.8■□□□□ 0.92
EXTL3O43909 AC097488.1-201ENST00000507834 756 ntBASIC20.8■□□□□ 0.92
EXTL3O43909 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.8■□□□□ 0.92
EXTL3O43909 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.8■□□□□ 0.92
EXTL3O43909 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.8■□□□□ 0.92
EXTL3O43909 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
EXTL3O43909 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
EXTL3O43909 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.8■□□□□ 0.92
EXTL3O43909 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
EXTL3O43909 AC096733.2-201ENST00000609937 1394 ntBASIC20.8■□□□□ 0.92
EXTL3O43909 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
EXTL3O43909 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.8■□□□□ 0.92
EXTL3O43909 AC079598.2-202ENST00000546624 1451 ntBASIC20.8■□□□□ 0.92
EXTL3O43909 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
EXTL3O43909 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
EXTL3O43909 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EXTL3O43909 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
EXTL3O43909 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
EXTL3O43909 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.79■□□□□ 0.92
EXTL3O43909 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
EXTL3O43909 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.79■□□□□ 0.92
EXTL3O43909 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EXTL3O43909 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
EXTL3O43909 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.79■□□□□ 0.92
EXTL3O43909 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.79■□□□□ 0.92
EXTL3O43909 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.79■□□□□ 0.92
EXTL3O43909 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EXTL3O43909 CKBP1-201ENST00000565489 1086 ntBASIC20.79■□□□□ 0.92
EXTL3O43909 SLC25A1P4-201ENST00000567977 778 ntBASIC20.79■□□□□ 0.92
EXTL3O43909 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.79■□□□□ 0.92
EXTL3O43909 LINC01023-201ENST00000606054 436 ntBASIC20.79■□□□□ 0.92
EXTL3O43909 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.79■□□□□ 0.92
EXTL3O43909 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.79■□□□□ 0.92
EXTL3O43909 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EXTL3O43909 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.79■□□□□ 0.92
EXTL3O43909 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
EXTL3O43909 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EXTL3O43909 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.78■□□□□ 0.92
EXTL3O43909 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
EXTL3O43909 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXTL3O43909 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EXTL3O43909 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.78■□□□□ 0.92
EXTL3O43909 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXTL3O43909 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.78■□□□□ 0.92
EXTL3O43909 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXTL3O43909 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.78■□□□□ 0.92
EXTL3O43909 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.78■□□□□ 0.92
EXTL3O43909 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXTL3O43909 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXTL3O43909 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EXTL3O43909 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EXTL3O43909 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.78■□□□□ 0.92
EXTL3O43909 BX088651.1-201ENST00000540551 451 ntBASIC20.78■□□□□ 0.92
EXTL3O43909 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.78■□□□□ 0.92
EXTL3O43909 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXTL3O43909 AP000525.1-201ENST00000608286 694 ntBASIC20.78■□□□□ 0.92
EXTL3O43909 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXTL3O43909 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
EXTL3O43909 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXTL3O43909 IRX1P1-201ENST00000438849 1838 ntBASIC20.78■□□□□ 0.92
EXTL3O43909 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.78■□□□□ 0.92
EXTL3O43909 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXTL3O43909 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXTL3O43909 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.78■□□□□ 0.92
EXTL3O43909 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EXTL3O43909 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.77■□□□□ 0.92
EXTL3O43909 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EXTL3O43909 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.77■□□□□ 0.92
EXTL3O43909 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
EXTL3O43909 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
EXTL3O43909 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EXTL3O43909 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EXTL3O43909 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EXTL3O43909 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EXTL3O43909 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.77■□□□□ 0.92
EXTL3O43909 AP005242.2-201ENST00000580065 1175 ntBASIC20.77■□□□□ 0.92
EXTL3O43909 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EXTL3O43909 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
EXTL3O43909 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
EXTL3O43909 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EXTL3O43909 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
EXTL3O43909 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.77■□□□□ 0.91
EXTL3O43909 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.77■□□□□ 0.91
EXTL3O43909 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.77■□□□□ 0.91
EXTL3O43909 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
EXTL3O43909 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EXTL3O43909 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.76■□□□□ 0.91
EXTL3O43909 FEM1AP3-201ENST00000403722 1741 ntBASIC20.76■□□□□ 0.91
EXTL3O43909 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EXTL3O43909 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EXTL3O43909 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.76■□□□□ 0.91
EXTL3O43909 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EXTL3O43909 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EXTL3O43909 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EXTL3O43909 CRYGFP-201ENST00000418459 633 ntBASIC20.76■□□□□ 0.91
EXTL3O43909 MFAP1P1-201ENST00000442257 1255 ntBASIC20.76■□□□□ 0.91
EXTL3O43909 KRT18P21-201ENST00000515767 1272 ntBASIC20.76■□□□□ 0.91
EXTL3O43909 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EXTL3O43909 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
EXTL3O43909 AC010331.1-201ENST00000611423 582 ntBASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms