Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC85CA6NKD9 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
CCDC85CA6NKD9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CCDC85CA6NKD9 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC85CA6NKD9 POM121L3P-201ENST00000419331 1163 ntBASIC21.27■■□□□ 1
CCDC85CA6NKD9 RNA5SP416-201ENST00000516838 111 ntBASIC21.27■■□□□ 1
CCDC85CA6NKD9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC85CA6NKD9 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.27■■□□□ 1
CCDC85CA6NKD9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC85CA6NKD9 RBM7-207ENST00000544582 692 ntTSL 3 BASIC21.27■■□□□ 1
CCDC85CA6NKD9 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC21.27■■□□□ 1
CCDC85CA6NKD9 MIR5100-201ENST00000579544 119 ntBASIC21.27■■□□□ 1
CCDC85CA6NKD9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.27■■□□□ 1
CCDC85CA6NKD9 MTDHP5-201ENST00000598980 586 ntBASIC21.27■■□□□ 1
CCDC85CA6NKD9 AL592071.1-201ENST00000611956 408 ntBASIC21.27■■□□□ 1
CCDC85CA6NKD9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
CCDC85CA6NKD9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CCDC85CA6NKD9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC85CA6NKD9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC85CA6NKD9 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC85CA6NKD9 AC020928.2-201ENST00000588717 2197 ntBASIC21.26■□□□□ 0.99
CCDC85CA6NKD9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CCDC85CA6NKD9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC85CA6NKD9 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC85CA6NKD9 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC85CA6NKD9 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.26■□□□□ 0.99
CCDC85CA6NKD9 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CCDC85CA6NKD9 TAF8-206ENST00000472818 719 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC85CA6NKD9 HS6ST1P1-201ENST00000481504 1234 ntBASIC21.26■□□□□ 0.99
CCDC85CA6NKD9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
CCDC85CA6NKD9 AP005901.3-202ENST00000581653 237 ntBASIC21.26■□□□□ 0.99
CCDC85CA6NKD9 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
CCDC85CA6NKD9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CCDC85CA6NKD9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
CCDC85CA6NKD9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC85CA6NKD9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC85CA6NKD9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.26■□□□□ 0.99
CCDC85CA6NKD9 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC85CA6NKD9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC85CA6NKD9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC85CA6NKD9 PHGDH-210ENST00000641115 1638 ntBASIC21.26■□□□□ 0.99
CCDC85CA6NKD9 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 AC023274.1-201ENST00000418278 595 ntBASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 AC132008.2-207ENST00000454517 770 ntBASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 CFL1-202ENST00000524553 860 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 AC138761.1-201ENST00000584393 385 ntBASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 Z83851.2-201ENST00000609564 659 ntBASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 AC063926.2-201ENST00000623766 1308 ntBASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC85CA6NKD9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC85CA6NKD9 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC85CA6NKD9 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
CCDC85CA6NKD9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC85CA6NKD9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC85CA6NKD9 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CCDC85CA6NKD9 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC85CA6NKD9 RPS2P1-201ENST00000434010 821 ntBASIC21.24■□□□□ 0.99
CCDC85CA6NKD9 AC245100.3-201ENST00000441281 285 ntBASIC21.24■□□□□ 0.99
CCDC85CA6NKD9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.24■□□□□ 0.99
CCDC85CA6NKD9 GUSBP12-201ENST00000513727 720 ntBASIC21.24■□□□□ 0.99
CCDC85CA6NKD9 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC85CA6NKD9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.24■□□□□ 0.99
CCDC85CA6NKD9 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CCDC85CA6NKD9 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC85CA6NKD9 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC85CA6NKD9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC85CA6NKD9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC85CA6NKD9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC85CA6NKD9 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC85CA6NKD9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC85CA6NKD9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC85CA6NKD9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC85CA6NKD9 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC85CA6NKD9 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
CCDC85CA6NKD9 BCRP1-201ENST00000444246 691 ntBASIC21.23■□□□□ 0.99
CCDC85CA6NKD9 AC092910.1-201ENST00000482027 1129 ntBASIC21.23■□□□□ 0.99
CCDC85CA6NKD9 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms