Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 AL121829.2-201ENST00000620908 328 ntBASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV9S1A1TA0A576 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV9S1A1TA0A576 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV9S1A1TA0A576 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV9S1A1TA0A576 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV9S1A1TA0A576 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.29■□□□□ 0.68
TCRBV9S1A1TA0A576 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV9S1A1TA0A576 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV9S1A1TA0A576 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV9S1A1TA0A576 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.29■□□□□ 0.68
TCRBV9S1A1TA0A576 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TCRBV9S1A1TA0A576 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TCRBV9S1A1TA0A576 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.29■□□□□ 0.68
TCRBV9S1A1TA0A576 NCF1B-203ENST00000435988 1254 ntBASIC19.29■□□□□ 0.68
TCRBV9S1A1TA0A576 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.29■□□□□ 0.68
TCRBV9S1A1TA0A576 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
TCRBV9S1A1TA0A576 AL390961.4-201ENST00000623958 2535 ntBASIC19.29■□□□□ 0.68
TCRBV9S1A1TA0A576 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TCRBV9S1A1TA0A576 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TCRBV9S1A1TA0A576 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TCRBV9S1A1TA0A576 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
TCRBV9S1A1TA0A576 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TCRBV9S1A1TA0A576 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TCRBV9S1A1TA0A576 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.28■□□□□ 0.68
TCRBV9S1A1TA0A576 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.28■□□□□ 0.68
TCRBV9S1A1TA0A576 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.28■□□□□ 0.68
TCRBV9S1A1TA0A576 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.28■□□□□ 0.68
TCRBV9S1A1TA0A576 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.28■□□□□ 0.68
TCRBV9S1A1TA0A576 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.28■□□□□ 0.68
TCRBV9S1A1TA0A576 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.28■□□□□ 0.68
TCRBV9S1A1TA0A576 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TCRBV9S1A1TA0A576 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TCRBV9S1A1TA0A576 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TCRBV9S1A1TA0A576 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.28■□□□□ 0.68
TCRBV9S1A1TA0A576 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TCRBV9S1A1TA0A576 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TCRBV9S1A1TA0A576 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TCRBV9S1A1TA0A576 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.28■□□□□ 0.68
TCRBV9S1A1TA0A576 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.28■□□□□ 0.68
TCRBV9S1A1TA0A576 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.28■□□□□ 0.68
TCRBV9S1A1TA0A576 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.28■□□□□ 0.68
TCRBV9S1A1TA0A576 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TCRBV9S1A1TA0A576 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
TCRBV9S1A1TA0A576 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TCRBV9S1A1TA0A576 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TCRBV9S1A1TA0A576 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TCRBV9S1A1TA0A576 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TCRBV9S1A1TA0A576 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TCRBV9S1A1TA0A576 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TCRBV9S1A1TA0A576 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.27■□□□□ 0.68
TCRBV9S1A1TA0A576 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TCRBV9S1A1TA0A576 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TCRBV9S1A1TA0A576 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
TCRBV9S1A1TA0A576 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.27■□□□□ 0.68
TCRBV9S1A1TA0A576 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TCRBV9S1A1TA0A576 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TCRBV9S1A1TA0A576 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TCRBV9S1A1TA0A576 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.27■□□□□ 0.68
TCRBV9S1A1TA0A576 AC083880.1-201ENST00000608266 535 ntBASIC19.27■□□□□ 0.68
TCRBV9S1A1TA0A576 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.27■□□□□ 0.68
TCRBV9S1A1TA0A576 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.27■□□□□ 0.68
TCRBV9S1A1TA0A576 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.27■□□□□ 0.68
TCRBV9S1A1TA0A576 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TCRBV9S1A1TA0A576 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TCRBV9S1A1TA0A576 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TCRBV9S1A1TA0A576 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.27■□□□□ 0.67
TCRBV9S1A1TA0A576 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TCRBV9S1A1TA0A576 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TCRBV9S1A1TA0A576 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV9S1A1TA0A576 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV9S1A1TA0A576 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms