Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
DNMT3AQ9Y6K1 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.71□□□□□ -1.49
DNMT3AQ9Y6K1 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
DNMT3AQ9Y6K1 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
DNMT3AQ9Y6K1 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 Y_RNA.2-201ENST00000362330 96 ntBASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 SNORA63.4-201ENST00000362763 126 ntBASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 SNORA51.11-201ENST00000384442 131 ntBASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 Y_RNA.497-201ENST00000384447 98 ntBASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 SNORA70E-201ENST00000384492 135 ntBASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 SNORA41-201ENST00000384675 132 ntBASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 MIR215-201ENST00000384858 110 ntBASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 RNA5SP219-201ENST00000390940 113 ntBASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 RNU2-52P-201ENST00000410680 190 ntBASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 RNU6-394P-201ENST00000410735 107 ntBASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 AC096664.2-201ENST00000411843 406 ntBASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 AC092447.6-201ENST00000414578 210 ntBASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 RPS3P2-201ENST00000421346 701 ntBASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 AC073410.1-201ENST00000435125 589 ntBASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 AC004866.2-201ENST00000438285 481 ntBASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 AC007998.1-201ENST00000474156 672 ntBASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 RN7SL570P-201ENST00000484405 292 ntBASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 SNORA31.6-201ENST00000516241 130 ntBASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 AC011494.1-201ENST00000596454 237 ntBASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 AL138889.2-201ENST00000603883 242 ntBASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 AL591926.4-201ENST00000616895 298 ntBASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 U73479.1-201ENST00000618062 168 ntBASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
DNMT3AQ9Y6K1 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 BX322639.1-202ENST00000423987 2213 ntBASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 RNU6-946P-201ENST00000383878 107 ntBASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 AL583834.1-201ENST00000406943 343 ntBASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 Z99755.1-201ENST00000414048 380 ntBASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 SDHDP6-201ENST00000414693 480 ntBASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 UBE2D3P2-201ENST00000424409 445 ntBASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 CRIP1P1-201ENST00000427567 185 ntBASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 RPL23AP33-201ENST00000442301 452 ntBASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 SCARNA18-201ENST00000459004 134 ntBASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 AC104472.2-201ENST00000469035 601 ntBASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 AC006539.1-201ENST00000481419 501 ntBASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 PGAM1P13-201ENST00000507497 754 ntBASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 SNORD46.2-201ENST00000516021 102 ntBASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 AC021678.3-201ENST00000517893 476 ntBASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 MIR4679-2-201ENST00000578358 77 ntBASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 MIR5692C1-201ENST00000585309 91 ntBASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 AC008521.1-201ENST00000587471 187 ntBASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 AL034351.1-201ENST00000605288 668 ntBASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 RN7SL544P-201ENST00000617232 284 ntBASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 RN7SL763P-201ENST00000620922 284 ntBASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 AL589994.2-201ENST00000621124 579 ntBASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
DNMT3AQ9Y6K1 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 HAUS6P2-201ENST00000433254 2404 ntBASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms