Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.67□□□□□ -1.66
USP25Q9UHP3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP25Q9UHP3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.67□□□□□ -1.66
USP25Q9UHP3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP25Q9UHP3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP25Q9UHP3 RNA5SP447-201ENST00000363749 119 ntBASIC4.67□□□□□ -1.66
USP25Q9UHP3 Y_RNA.256-201ENST00000364594 104 ntBASIC4.67□□□□□ -1.66
USP25Q9UHP3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP25Q9UHP3 Y_RNA.390-201ENST00000383932 102 ntBASIC4.67□□□□□ -1.66
USP25Q9UHP3 RPS3AP3-201ENST00000411933 242 ntBASIC4.67□□□□□ -1.66
USP25Q9UHP3 MTCO3P12-201ENST00000416718 547 ntBASIC4.67□□□□□ -1.66
USP25Q9UHP3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.67□□□□□ -1.66
USP25Q9UHP3 AC073614.1-201ENST00000438690 650 ntBASIC4.67□□□□□ -1.66
USP25Q9UHP3 MTCO3P18-201ENST00000440206 761 ntBASIC4.67□□□□□ -1.66
USP25Q9UHP3 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.67□□□□□ -1.66
USP25Q9UHP3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.67□□□□□ -1.66
USP25Q9UHP3 AC109327.1-201ENST00000471666 403 ntBASIC4.67□□□□□ -1.66
USP25Q9UHP3 RN7SL271P-201ENST00000487601 295 ntBASIC4.67□□□□□ -1.66
USP25Q9UHP3 AC078918.1-201ENST00000498515 228 ntBASIC4.67□□□□□ -1.66
USP25Q9UHP3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.67□□□□□ -1.66
USP25Q9UHP3 AC108078.1-201ENST00000508073 725 ntBASIC4.67□□□□□ -1.66
USP25Q9UHP3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.67□□□□□ -1.66
USP25Q9UHP3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
USP25Q9UHP3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USP25Q9UHP3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.67□□□□□ -1.66
USP25Q9UHP3 AC012182.1-201ENST00000570133 895 ntBASIC4.67□□□□□ -1.66
USP25Q9UHP3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.67□□□□□ -1.66
USP25Q9UHP3 AC009977.1-201ENST00000586015 570 ntBASIC4.67□□□□□ -1.66
USP25Q9UHP3 AC011451.2-201ENST00000604303 598 ntBASIC4.67□□□□□ -1.66
USP25Q9UHP3 AL592295.2-201ENST00000612578 206 ntBASIC4.67□□□□□ -1.66
USP25Q9UHP3 C2orf27A-204ENST00000623058 969 ntBASIC4.67□□□□□ -1.66
USP25Q9UHP3 AL356585.4-201ENST00000623078 1229 ntBASIC4.67□□□□□ -1.66
USP25Q9UHP3 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.67□□□□□ -1.66
USP25Q9UHP3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USP25Q9UHP3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP25Q9UHP3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP25Q9UHP3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
USP25Q9UHP3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
USP25Q9UHP3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.66□□□□□ -1.66
USP25Q9UHP3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP25Q9UHP3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
USP25Q9UHP3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
USP25Q9UHP3 AL365440.1-201ENST00000436135 2167 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.66□□□□□ -1.66
USP25Q9UHP3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.66□□□□□ -1.66
USP25Q9UHP3 OR11H4-201ENST00000315409 1082 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 Y_RNA.234-201ENST00000364409 97 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 RNU6-744P-201ENST00000365557 107 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 RNU6-533P-201ENST00000384144 107 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 RNU6-1316P-201ENST00000384242 108 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
USP25Q9UHP3 AL138878.1-201ENST00000405131 347 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 MIR1277-201ENST00000408536 78 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 Y_RNA.608-201ENST00000410647 95 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 MTCO1P17-201ENST00000411522 491 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.66□□□□□ -1.66
USP25Q9UHP3 C1DP2-201ENST00000418167 426 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 AC009480.2-201ENST00000422916 432 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.66□□□□□ -1.66
USP25Q9UHP3 AC016712.1-201ENST00000431088 378 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
USP25Q9UHP3 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.66□□□□□ -1.66
USP25Q9UHP3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.66□□□□□ -1.66
USP25Q9UHP3 AL590365.1-201ENST00000450788 243 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 RN7SL93P-201ENST00000463035 293 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 ACTR3P3-201ENST00000480448 893 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.66□□□□□ -1.66
USP25Q9UHP3 AP001025.2-201ENST00000490908 477 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.66□□□□□ -1.66
USP25Q9UHP3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.66□□□□□ -1.66
USP25Q9UHP3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.66□□□□□ -1.66
USP25Q9UHP3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.66□□□□□ -1.66
USP25Q9UHP3 AC099522.1-202ENST00000514718 367 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 SNORA18.6-201ENST00000516792 115 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 NARSP2-201ENST00000518524 679 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.66□□□□□ -1.66
USP25Q9UHP3 MTND4LP18-201ENST00000526864 291 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 TOMM20P2-201ENST00000540082 421 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 AC126177.3-201ENST00000551839 688 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.66□□□□□ -1.66
USP25Q9UHP3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.66□□□□□ -1.66
USP25Q9UHP3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.66□□□□□ -1.66
USP25Q9UHP3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.66□□□□□ -1.66
USP25Q9UHP3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.66□□□□□ -1.66
USP25Q9UHP3 AC006270.2-201ENST00000578523 652 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 AC012417.1-201ENST00000582307 1039 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 AC006504.3-201ENST00000586818 523 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 AC069234.5-201ENST00000611056 416 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 AL713922.2-201ENST00000619384 716 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
USP25Q9UHP3 AC092447.10-201ENST00000620607 1652 ntBASIC4.66□□□□□ -1.66
USP25Q9UHP3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP25Q9UHP3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP25Q9UHP3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.65□□□□□ -1.66
USP25Q9UHP3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
USP25Q9UHP3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
USP25Q9UHP3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
USP25Q9UHP3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
USP25Q9UHP3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms