Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM39Q9HCM9 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.69□□□□□ -1.66
TRIM39Q9HCM9 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.69□□□□□ -1.66
TRIM39Q9HCM9 RN7SL652P-201ENST00000577769 300 ntBASIC4.69□□□□□ -1.66
TRIM39Q9HCM9 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM39Q9HCM9 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM39Q9HCM9 MIR6780A-201ENST00000615089 68 ntBASIC4.69□□□□□ -1.66
TRIM39Q9HCM9 AC110801.1-201ENST00000623590 212 ntBASIC4.69□□□□□ -1.66
TRIM39Q9HCM9 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM39Q9HCM9 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM39Q9HCM9 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM39Q9HCM9 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM39Q9HCM9 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM39Q9HCM9 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM39Q9HCM9 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.69□□□□□ -1.66
TRIM39Q9HCM9 AL136964.1-201ENST00000622038 2990 ntBASIC4.69□□□□□ -1.66
TRIM39Q9HCM9 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
TRIM39Q9HCM9 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
TRIM39Q9HCM9 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.69□□□□□ -1.66
TRIM39Q9HCM9 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM39Q9HCM9 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.69□□□□□ -1.66
TRIM39Q9HCM9 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.69□□□□□ -1.66
TRIM39Q9HCM9 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM39Q9HCM9 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM39Q9HCM9 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 AL391684.1-202ENST00000641293 1636 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 AC107068.1-201ENST00000563286 4218 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 MTND4P29-201ENST00000503122 1372 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 AC004972.1-201ENST00000623934 2209 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 AC139713.2-215ENST00000641428 5037 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 AL137003.2-201ENST00000606924 2538 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 XIAPP3-201ENST00000312918 795 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 Y_RNA.11-201ENST00000362375 109 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 SNORA23-201ENST00000365128 182 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 AL590762.2-201ENST00000395798 571 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 TXNP7-201ENST00000406296 293 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 U3.35-201ENST00000408405 208 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 RN7SKP267-201ENST00000410381 285 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 RPL37P18-201ENST00000411602 243 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 RPL7AP73-201ENST00000413490 353 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 E2F6P2-201ENST00000420708 748 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 MTCYBP8-201ENST00000422855 651 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 MTND4P28-201ENST00000426217 387 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 AC090774.1-201ENST00000435925 246 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 RPL23AP43-201ENST00000446445 471 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 ELOCP23-201ENST00000452014 332 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 AL513533.1-201ENST00000453728 415 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 AC010326.1-201ENST00000462726 602 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 RPL23AP55-201ENST00000498163 452 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 RNU4-29P-201ENST00000515943 174 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 RNU6-390P-201ENST00000516259 103 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 BNIP3P6-201ENST00000549284 499 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 FKBP1BP1-201ENST00000553366 325 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 AL110118.1-201ENST00000553543 400 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 AC087477.6-201ENST00000559595 843 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 MIR4775-201ENST00000581168 75 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 AP001029.3-201ENST00000588063 596 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 AC010525.2-201ENST00000590920 195 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 HMGN2P28-201ENST00000606102 262 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 AC108467.2-201ENST00000617640 1597 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 DHX9P1-201ENST00000436565 3076 ntBASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM39Q9HCM9 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM39Q9HCM9 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
TRIM39Q9HCM9 MTND4P14-201ENST00000435799 1354 ntBASIC4.67□□□□□ -1.66
TRIM39Q9HCM9 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM39Q9HCM9 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM39Q9HCM9 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM39Q9HCM9 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM39Q9HCM9 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM39Q9HCM9 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM39Q9HCM9 RNU6-1074P-201ENST00000383995 104 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms