Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
CDT1Q9H211 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDT1Q9H211 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDT1Q9H211 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.95□□□□□ -1.78
CDT1Q9H211 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDT1Q9H211 NMD3P1-201ENST00000439704 1488 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 RNA5SP502-201ENST00000362694 119 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 RNU5F-6P-201ENST00000362979 116 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 RNVU1-3-201ENST00000364313 161 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 RNU6-1283P-201ENST00000365314 105 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.95□□□□□ -1.78
CDT1Q9H211 HSPE1P8-201ENST00000406997 288 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 AC007899.1-201ENST00000412776 775 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 MTND1P21-201ENST00000412991 285 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.95□□□□□ -1.78
CDT1Q9H211 AC012065.2-201ENST00000421295 375 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.95□□□□□ -1.78
CDT1Q9H211 GLRXP1-201ENST00000423261 334 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 MTCYBP5-201ENST00000423752 1135 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.95□□□□□ -1.78
CDT1Q9H211 HMGN2P31-201ENST00000432430 273 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.95□□□□□ -1.78
CDT1Q9H211 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CDT1Q9H211 AC002381.1-201ENST00000447049 280 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.95□□□□□ -1.78
CDT1Q9H211 AL592447.1-201ENST00000447592 540 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 AC010655.1-201ENST00000449336 292 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.95□□□□□ -1.78
CDT1Q9H211 FGF7P3-201ENST00000454645 303 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 RNA5SP269-201ENST00000459032 137 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 HMGB1P36-201ENST00000487709 576 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 POU5F1P7-201ENST00000508759 541 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 CDC42P4-201ENST00000510507 563 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDT1Q9H211 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.95□□□□□ -1.78
CDT1Q9H211 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.95□□□□□ -1.78
CDT1Q9H211 SNORA70.18-201ENST00000516696 98 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.95□□□□□ -1.78
CDT1Q9H211 COX6CP8-201ENST00000522620 226 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 AP003392.2-201ENST00000527269 208 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 AP004247.1-201ENST00000531556 1289 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.95□□□□□ -1.78
CDT1Q9H211 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.95□□□□□ -1.78
CDT1Q9H211 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.95□□□□□ -1.78
CDT1Q9H211 AC007424.1-203ENST00000554613 687 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.95□□□□□ -1.78
CDT1Q9H211 AC091489.2-201ENST00000566263 604 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.95□□□□□ -1.78
CDT1Q9H211 MIR544B-201ENST00000582372 78 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.95□□□□□ -1.78
CDT1Q9H211 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.95□□□□□ -1.78
CDT1Q9H211 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.95□□□□□ -1.78
CDT1Q9H211 BBIP1P1-201ENST00000602999 279 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 AP000403.1-201ENST00000603349 851 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 RPL23AP92-201ENST00000603609 255 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 AC091805.2-201ENST00000603848 235 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 RBM11P1-201ENST00000604951 799 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 MIR6075-201ENST00000620782 95 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 AC004009.2-201ENST00000623016 728 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.95□□□□□ -1.78
CDT1Q9H211 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.95□□□□□ -1.78
CDT1Q9H211 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.95□□□□□ -1.78
CDT1Q9H211 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDT1Q9H211 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CDT1Q9H211 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDT1Q9H211 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDT1Q9H211 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDT1Q9H211 AC106871.1-201ENST00000568324 3102 ntBASIC3.95□□□□□ -1.78
CDT1Q9H211 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDT1Q9H211 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDT1Q9H211 Y_RNA.6-201ENST00000362350 114 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 RNA5SP119-201ENST00000362715 117 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 Y_RNA.97-201ENST00000363094 102 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 SNORA70E-201ENST00000384492 135 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 SNORA11.1-201ENST00000408133 129 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 MIR548F1-201ENST00000408667 84 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.94□□□□□ -1.78
CDT1Q9H211 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.94□□□□□ -1.78
CDT1Q9H211 RPS29P4-201ENST00000414733 161 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 AC093578.1-201ENST00000415219 368 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 RPS27AP14-201ENST00000422868 454 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.94□□□□□ -1.78
CDT1Q9H211 PSMA6P3-201ENST00000428242 164 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.94□□□□□ -1.78
CDT1Q9H211 CYCSP4-201ENST00000429682 331 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.94□□□□□ -1.78
CDT1Q9H211 MTATP6P23-201ENST00000440153 476 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.94□□□□□ -1.78
CDT1Q9H211 AL358232.1-201ENST00000448030 501 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 NANOGNBP1-201ENST00000448444 480 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 PAXBP1P1-201ENST00000449315 447 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.94□□□□□ -1.78
CDT1Q9H211 SNORD105B-201ENST00000458770 79 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.94□□□□□ -1.78
CDT1Q9H211 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.94□□□□□ -1.78
CDT1Q9H211 AC024589.1-201ENST00000512207 263 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 FTH1P9-201ENST00000513251 355 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 AC034159.1-201ENST00000513885 583 ntBASIC3.94□□□□□ -1.78
CDT1Q9H211 RN7SKP13-201ENST00000515933 244 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms