Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 USP9YP7-201ENST00000436723 430 ntBASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 USP9YP32-201ENST00000452432 430 ntBASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 RPL7P23-201ENST00000493874 747 ntBASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 AC026427.2-201ENST00000506228 536 ntBASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 AC079140.3-201ENST00000511111 550 ntBASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 AC017037.2-201ENST00000513850 890 ntBASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 MTCO2P32-201ENST00000514865 403 ntBASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 RNA5SP164-201ENST00000516533 110 ntBASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 AP000907.2-201ENST00000530827 353 ntBASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 OR5B10P-201ENST00000532869 642 ntBASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 CYP4A43P-201ENST00000568156 121 ntBASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 AL121834.1-201ENST00000572284 509 ntBASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 AC079089.3-201ENST00000603094 673 ntBASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 MIR6130-201ENST00000619419 109 ntBASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 AL590240.3-201ENST00000621416 943 ntBASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 AC244258.1-201ENST00000637553 1071 ntBASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RTFDC1Q9BY42 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 MTND5P33-201ENST00000571250 1450 ntBASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 Y_RNA.46-201ENST00000362695 102 ntBASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 RPS20P2-201ENST00000402520 389 ntBASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 BX890604.2-201ENST00000427883 474 ntBASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 HMGN2P21-201ENST00000447764 270 ntBASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 RPS17P13-201ENST00000448974 407 ntBASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 AC010655.1-201ENST00000449336 292 ntBASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 AP003467.2-201ENST00000520175 319 ntBASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 AC126177.3-201ENST00000551839 688 ntBASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 AC006960.3-201ENST00000561845 705 ntBASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 AC010928.3-201ENST00000587712 541 ntBASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 RNU6-87P-201ENST00000607561 108 ntBASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 AC004908.2-201ENST00000609090 574 ntBASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 AC103710.1-201ENST00000610003 901 ntBASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 AC008250.2-201ENST00000615261 205 ntBASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 AC104010.1-201ENST00000616889 150 ntBASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 AL603839.4-201ENST00000624658 1005 ntBASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 AL392088.2-201ENST00000637607 285 ntBASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RTFDC1Q9BY42 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.68□□□□□ -1.66
RTFDC1Q9BY42 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RTFDC1Q9BY42 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.68□□□□□ -1.66
RTFDC1Q9BY42 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RTFDC1Q9BY42 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.68□□□□□ -1.66
RTFDC1Q9BY42 RNA5SP167-201ENST00000365461 116 ntBASIC4.68□□□□□ -1.66
RTFDC1Q9BY42 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.68□□□□□ -1.66
RTFDC1Q9BY42 OR5H15-201ENST00000383696 930 ntBASIC4.68□□□□□ -1.66
RTFDC1Q9BY42 RNU6-114P-201ENST00000384704 105 ntBASIC4.68□□□□□ -1.66
RTFDC1Q9BY42 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RTFDC1Q9BY42 MRPL42P2-201ENST00000403169 426 ntBASIC4.68□□□□□ -1.66
RTFDC1Q9BY42 RNU2-16P-201ENST00000410712 136 ntBASIC4.68□□□□□ -1.66
RTFDC1Q9BY42 EIF4EP1-201ENST00000422311 642 ntBASIC4.68□□□□□ -1.66
RTFDC1Q9BY42 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.68□□□□□ -1.66
RTFDC1Q9BY42 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms