Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AC002550.2-201ENST00000621246 394 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 AC139713.2-214ENST00000642059 1811 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 AC006020.1-201ENST00000420179 1854 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.34□□□□□ -1.71
NDC1Q9BTX1 RAD17P1-201ENST00000418130 2042 ntBASIC4.34□□□□□ -1.71
NDC1Q9BTX1 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.34□□□□□ -1.71
NDC1Q9BTX1 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.34□□□□□ -1.71
NDC1Q9BTX1 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NDC1Q9BTX1 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NDC1Q9BTX1 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.34□□□□□ -1.71
NDC1Q9BTX1 FRG1CP-201ENST00000358464 769 ntBASIC4.34□□□□□ -1.71
NDC1Q9BTX1 AL122016.1-201ENST00000403365 367 ntBASIC4.34□□□□□ -1.71
NDC1Q9BTX1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.34□□□□□ -1.71
NDC1Q9BTX1 RPL35AP12-201ENST00000425362 338 ntBASIC4.34□□□□□ -1.71
NDC1Q9BTX1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.34□□□□□ -1.71
NDC1Q9BTX1 AL365400.1-201ENST00000431854 640 ntBASIC4.34□□□□□ -1.71
NDC1Q9BTX1 FTH1P1-201ENST00000437933 532 ntBASIC4.34□□□□□ -1.71
NDC1Q9BTX1 RPL23AP93-201ENST00000440847 484 ntBASIC4.34□□□□□ -1.71
NDC1Q9BTX1 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.34□□□□□ -1.71
NDC1Q9BTX1 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.34□□□□□ -1.71
NDC1Q9BTX1 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.34□□□□□ -1.71
NDC1Q9BTX1 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.34□□□□□ -1.71
NDC1Q9BTX1 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.34□□□□□ -1.71
NDC1Q9BTX1 AC108059.3-201ENST00000456388 214 ntBASIC4.34□□□□□ -1.71
NDC1Q9BTX1 ST13P14-201ENST00000474095 734 ntBASIC4.34□□□□□ -1.71
NDC1Q9BTX1 NIPA2P2-201ENST00000496376 1083 ntBASIC4.34□□□□□ -1.71
NDC1Q9BTX1 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.34□□□□□ -1.71
NDC1Q9BTX1 HIGD1AP3-201ENST00000515857 278 ntBASIC4.34□□□□□ -1.71
NDC1Q9BTX1 RN7SKP234-201ENST00000517173 224 ntBASIC4.34□□□□□ -1.71
NDC1Q9BTX1 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.34□□□□□ -1.71
NDC1Q9BTX1 AL442663.2-201ENST00000554385 511 ntBASIC4.34□□□□□ -1.71
NDC1Q9BTX1 COX6CP3-201ENST00000580869 223 ntBASIC4.34□□□□□ -1.71
NDC1Q9BTX1 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.34□□□□□ -1.71
NDC1Q9BTX1 AC010928.3-201ENST00000587712 541 ntBASIC4.34□□□□□ -1.71
NDC1Q9BTX1 AC005498.1-201ENST00000592125 465 ntBASIC4.34□□□□□ -1.71
NDC1Q9BTX1 AC243960.4-201ENST00000600532 288 ntBASIC4.34□□□□□ -1.71
NDC1Q9BTX1 AL356218.2-201ENST00000605264 187 ntBASIC4.34□□□□□ -1.71
NDC1Q9BTX1 AC040168.1-201ENST00000623594 991 ntBASIC4.34□□□□□ -1.71
NDC1Q9BTX1 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.34□□□□□ -1.71
NDC1Q9BTX1 RIOK3P1-201ENST00000418778 1528 ntBASIC4.34□□□□□ -1.71
NDC1Q9BTX1 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NDC1Q9BTX1 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NDC1Q9BTX1 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NDC1Q9BTX1 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
NDC1Q9BTX1 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
NDC1Q9BTX1 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.34□□□□□ -1.72
NDC1Q9BTX1 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
NDC1Q9BTX1 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NDC1Q9BTX1 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NDC1Q9BTX1 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NDC1Q9BTX1 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.33□□□□□ -1.72
NDC1Q9BTX1 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NDC1Q9BTX1 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NDC1Q9BTX1 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NDC1Q9BTX1 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
NDC1Q9BTX1 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NDC1Q9BTX1 SNORA63-201ENST00000363450 132 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 Y_RNA.255-201ENST00000364581 97 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 SNORA51.2-201ENST00000364595 132 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 RNY3P13-201ENST00000365542 102 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 AC068538.1-201ENST00000376856 336 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 MIR19A-201ENST00000384878 82 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 U3.22-201ENST00000391120 215 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 RPL32P23-201ENST00000397237 405 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 AL136116.1-201ENST00000403591 381 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 MIR1302-11-201ENST00000408051 138 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 MIR1302-9-201ENST00000408365 138 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 MIR1302-10-201ENST00000408734 138 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 RNA5SP296-201ENST00000410523 111 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.33□□□□□ -1.72
NDC1Q9BTX1 AL354751.2-201ENST00000415471 210 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 AC011998.1-201ENST00000433403 117 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 AL138799.3-201ENST00000438968 350 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 MRPL50P4-201ENST00000446432 475 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.33□□□□□ -1.72
NDC1Q9BTX1 AC078785.3-201ENST00000476607 425 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 EIF4EP3-201ENST00000498782 656 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.33□□□□□ -1.72
NDC1Q9BTX1 FTH1P21-201ENST00000512179 511 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 RNU7-30P-201ENST00000516835 62 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 SUB1P1-201ENST00000524415 382 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 PSMA2P1-201ENST00000526365 646 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NDC1Q9BTX1 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.33□□□□□ -1.72
NDC1Q9BTX1 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.33□□□□□ -1.72
NDC1Q9BTX1 AC011611.1-201ENST00000552179 197 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.33□□□□□ -1.72
NDC1Q9BTX1 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.33□□□□□ -1.72
NDC1Q9BTX1 AL008729.2-201ENST00000606393 473 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 MIR1302-2-201ENST00000607096 138 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 AC004908.2-201ENST00000609090 574 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 AC105429.2-201ENST00000610567 517 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms