Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 USP9YP20-201ENST00000419224 558 ntBASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 ARPC3P1-201ENST00000437218 533 ntBASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 AP000942.1-201ENST00000463969 747 ntBASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 RN7SL429P-201ENST00000479090 223 ntBASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 RN7SL489P-201ENST00000486185 223 ntBASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 RN7SL327P-201ENST00000488659 223 ntBASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 AC009646.1-201ENST00000510455 318 ntBASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 MTCO2P4-201ENST00000517968 247 ntBASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 HMGN1P28-201ENST00000521340 364 ntBASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 AK6P1-201ENST00000540219 478 ntBASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 SNORD84-203ENST00000584275 78 ntBASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 MIR3936-201ENST00000584304 110 ntBASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 AC008752.3-201ENST00000588113 712 ntBASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 AC006254.3-201ENST00000603353 884 ntBASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 BX664608.1-201ENST00000610519 487 ntBASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 AL020991.1-201ENST00000612314 373 ntBASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 RN7SL853P-201ENST00000617250 223 ntBASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 AC009268.2-201ENST00000621925 457 ntBASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 ZNF285B-201ENST00000561698 1767 ntBASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 AC006026.1-201ENST00000444025 1803 ntBASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 AC016588.2-201ENST00000632484 3021 ntBASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 AC007390.2-201ENST00000606229 3803 ntBASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 GNG5P1-201ENST00000255500 204 ntBASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 Y_RNA.295-201ENST00000364918 102 ntBASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 Y_RNA.296-201ENST00000364930 108 ntBASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 Y_RNA.573-201ENST00000384763 105 ntBASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 RPL21P111-201ENST00000418453 477 ntBASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 AP000907.1-201ENST00000428428 510 ntBASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 TIMM9P3-201ENST00000428659 274 ntBASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 COX6B1P7-201ENST00000430845 235 ntBASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 RPL19P16-201ENST00000433839 588 ntBASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 RBM43P1-201ENST00000476891 1081 ntBASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 AC093278.1-201ENST00000494700 600 ntBASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 AC025164.1-201ENST00000496249 478 ntBASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 AC136475.10-201ENST00000620253 385 ntBASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 U6.105-201ENST00000637379 88 ntBASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.48□□□□□ -1.69
LRFN3Q9BTN0 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 Y_RNA.160-201ENST00000363677 92 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 RNU6-1078P-201ENST00000364522 103 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 Y_RNA.263-201ENST00000364659 114 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 RNY4P34-201ENST00000364779 95 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 RNU6-534P-201ENST00000364877 106 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 RNVU1-14-201ENST00000384770 164 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 SNORA48.2-201ENST00000390926 124 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 AL356057.2-201ENST00000403318 432 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 AC078974.1-201ENST00000411597 223 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 BEND7P1-201ENST00000422058 457 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 HMGN2P31-201ENST00000432430 273 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 RPL35AP22-201ENST00000436855 335 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 AL049734.2-201ENST00000441066 616 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 RPL23AP43-201ENST00000446445 471 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 GAPDHP17-201ENST00000449858 1001 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms