Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 RPL23AP57-201ENST00000332361 466 ntBASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 RNU6-28P-201ENST00000362378 107 ntBASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 SNORA63.1-201ENST00000362493 131 ntBASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 TPMTP2-201ENST00000414372 726 ntBASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 MTCO2P5-201ENST00000422621 426 ntBASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 AC007742.1-201ENST00000425789 329 ntBASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 RPL21P66-201ENST00000426566 466 ntBASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 ZYG11AP1-201ENST00000430329 837 ntBASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 BX679664.1-201ENST00000434429 253 ntBASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 ELOCP26-201ENST00000436067 329 ntBASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 ARPC3P5-201ENST00000448802 534 ntBASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 RPL7P52-201ENST00000449200 742 ntBASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 RPL23AP35-201ENST00000451906 501 ntBASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 HMGB1P15-201ENST00000453854 435 ntBASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 BX322784.1-201ENST00000455793 1077 ntBASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 MEMO1P3-201ENST00000459811 302 ntBASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 AC008155.2-201ENST00000464337 397 ntBASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 AC004062.1-201ENST00000509926 645 ntBASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 OR4H12P-201ENST00000556269 907 ntBASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 AC087481.2-201ENST00000565492 330 ntBASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 AC012182.1-201ENST00000570133 895 ntBASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 MIR4276-201ENST00000584832 70 ntBASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 AC112220.3-201ENST00000605502 502 ntBASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 AC069200.1-201ENST00000609511 323 ntBASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.29□□□□□ -1.88
CCM2Q9BSQ5 OR4G11P-202ENST00000642116 1414 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 U3.19-201ENST00000390893 196 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 RNU6-952P-201ENST00000391164 108 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 RNU2-47P-201ENST00000410649 186 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 MTCYBP45-201ENST00000435243 565 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 HIGD1AP11-201ENST00000438361 280 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 MTCYBP34-201ENST00000439552 670 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 SDCBPP1-201ENST00000440192 890 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 snoU13.24-201ENST00000458998 104 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 RPL7P49-201ENST00000471402 708 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 AC021205.2-201ENST00000480069 347 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 RPS4XP22-201ENST00000480755 780 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 RPL21P13-201ENST00000488305 481 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 RN7SKP244-201ENST00000516513 307 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 MIR2276-201ENST00000516886 89 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 AC105185.1-201ENST00000518705 535 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 TRAV37-201ENST00000553906 342 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 AC005951.1-201ENST00000576706 485 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 AL162713.1-201ENST00000604480 262 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 AL390208.1-201ENST00000605885 644 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 AL136981.2-201ENST00000617319 734 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 AL607023.1-201ENST00000620045 248 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 AC004777.1-201ENST00000624317 287 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 AC007490.1-201ENST00000624321 703 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 CRYM-AS1-204ENST00000637983 556 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 AC103706.2-201ENST00000638080 240 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 AL049780.3-201ENST00000624612 1583 ntBASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCM2Q9BSQ5 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
CCM2Q9BSQ5 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCM2Q9BSQ5 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCM2Q9BSQ5 RPL7P26-201ENST00000333817 754 ntBASIC3.27□□□□□ -1.89
CCM2Q9BSQ5 SNORD113-6-201ENST00000363345 75 ntBASIC3.27□□□□□ -1.89
CCM2Q9BSQ5 RNA5SP267-201ENST00000364893 126 ntBASIC3.27□□□□□ -1.89
CCM2Q9BSQ5 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.27□□□□□ -1.89
CCM2Q9BSQ5 HMGN1P24-201ENST00000412282 298 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms