Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.88□□□□□ -1.95
EBF4Q9BQW3 U6.101-201ENST00000637707 76 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
EBF4Q9BQW3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
EBF4Q9BQW3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
EBF4Q9BQW3 NUP58P1-201ENST00000502546 1738 ntBASIC2.88□□□□□ -1.95
EBF4Q9BQW3 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
EBF4Q9BQW3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
EBF4Q9BQW3 RNA5SP258-201ENST00000362750 119 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 Y_RNA.192-201ENST00000363977 102 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 RNU6-560P-201ENST00000364007 108 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 RNU6-636P-201ENST00000384598 107 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 TAS2R15P-201ENST00000390674 928 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 MIR887-201ENST00000401258 79 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AL354719.1-201ENST00000406535 843 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 RNU6ATAC-201ENST00000408749 126 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AL008987.1-201ENST00000415528 237 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AC010099.3-201ENST00000423896 409 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.87□□□□□ -1.95
EBF4Q9BQW3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.87□□□□□ -1.95
EBF4Q9BQW3 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 HMGN2P31-201ENST00000432430 273 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AC007389.2-201ENST00000434630 306 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.87□□□□□ -1.95
EBF4Q9BQW3 PTENP1-201ENST00000447117 1215 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.87□□□□□ -1.95
EBF4Q9BQW3 RPL39P6-201ENST00000448289 150 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 RPL36AP33-201ENST00000450395 310 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AL445669.2-201ENST00000454425 421 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 HMGB1P25-201ENST00000468402 607 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AC020898.1-201ENST00000474167 787 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.87□□□□□ -1.95
EBF4Q9BQW3 MTCYBP17-201ENST00000503579 789 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 HMGB1P22-201ENST00000505315 124 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 PAICSP4-201ENST00000517543 1253 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 UBTFL10-201ENST00000528532 562 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 MTCYBP41-201ENST00000528913 1123 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 SLC2A13P1-201ENST00000531560 322 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
EBF4Q9BQW3 MTND4P33-201ENST00000556706 766 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AC006130.2-201ENST00000586202 326 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AC021749.1-201ENST00000604322 607 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AC069304.2-201ENST00000605154 435 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AL627309.6-201ENST00000606857 840 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.87□□□□□ -1.95
EBF4Q9BQW3 CR392039.5-201ENST00000623201 510 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AC018692.3-201ENST00000623929 123 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.87□□□□□ -1.95
EBF4Q9BQW3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.87□□□□□ -1.95
EBF4Q9BQW3 AL035425.3-201ENST00000564206 4996 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
EBF4Q9BQW3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
EBF4Q9BQW3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.87□□□□□ -1.95
EBF4Q9BQW3 MTND4P34-201ENST00000572715 1371 ntBASIC2.87□□□□□ -1.95
EBF4Q9BQW3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
EBF4Q9BQW3 AL136164.4-201ENST00000625013 2135 ntBASIC2.86□□□□□ -1.95
EBF4Q9BQW3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
EBF4Q9BQW3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.86□□□□□ -1.95
EBF4Q9BQW3 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
EBF4Q9BQW3 CDR1-202ENST00000625883 1485 ntBASIC2.86□□□□□ -1.95
EBF4Q9BQW3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
EBF4Q9BQW3 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
EBF4Q9BQW3 MIR607-201ENST00000385241 96 ntBASIC2.86□□□□□ -1.95
EBF4Q9BQW3 AL138880.1-201ENST00000405824 642 ntBASIC2.86□□□□□ -1.95
EBF4Q9BQW3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
EBF4Q9BQW3 RPS24P7-201ENST00000416921 246 ntBASIC2.86□□□□□ -1.95
EBF4Q9BQW3 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.86□□□□□ -1.95
EBF4Q9BQW3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.86□□□□□ -1.95
EBF4Q9BQW3 DUTP6-201ENST00000425573 462 ntBASIC2.86□□□□□ -1.95
EBF4Q9BQW3 USP9YP11-201ENST00000427537 717 ntBASIC2.86□□□□□ -1.95
EBF4Q9BQW3 MUPP-201ENST00000438111 566 ntBASIC2.86□□□□□ -1.95
EBF4Q9BQW3 AC092427.1-201ENST00000439177 601 ntBASIC2.86□□□□□ -1.95
EBF4Q9BQW3 H2AFZP6-201ENST00000444403 394 ntBASIC2.86□□□□□ -1.95
EBF4Q9BQW3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.86□□□□□ -1.95
EBF4Q9BQW3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.86□□□□□ -1.95
EBF4Q9BQW3 AL133547.1-201ENST00000448546 220 ntBASIC2.86□□□□□ -1.95
EBF4Q9BQW3 RPL37P4-201ENST00000448908 268 ntBASIC2.86□□□□□ -1.95
EBF4Q9BQW3 AL162389.1-201ENST00000449233 177 ntBASIC2.86□□□□□ -1.95
EBF4Q9BQW3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.86□□□□□ -1.95
EBF4Q9BQW3 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.86□□□□□ -1.95
EBF4Q9BQW3 RPS15AP17-201ENST00000470598 390 ntBASIC2.86□□□□□ -1.95
EBF4Q9BQW3 RPL23AP55-201ENST00000498163 452 ntBASIC2.86□□□□□ -1.95
EBF4Q9BQW3 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.86□□□□□ -1.95
EBF4Q9BQW3 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.86□□□□□ -1.95
EBF4Q9BQW3 AC110794.1-201ENST00000505816 425 ntBASIC2.86□□□□□ -1.95
EBF4Q9BQW3 AC021146.8-201ENST00000507455 733 ntBASIC2.86□□□□□ -1.95
EBF4Q9BQW3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.86□□□□□ -1.95
EBF4Q9BQW3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms