Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AP005597.4-201ENST00000526762 229 ntBASIC3.82□□□□□ -1.8
ZNF48Q96MX3 PARP1P2-201ENST00000556806 195 ntBASIC3.82□□□□□ -1.8
ZNF48Q96MX3 AC020661.2-201ENST00000560114 134 ntBASIC3.82□□□□□ -1.8
ZNF48Q96MX3 AC105129.1-201ENST00000560250 297 ntBASIC3.82□□□□□ -1.8
ZNF48Q96MX3 SULT1C2P1-202ENST00000562418 459 ntBASIC3.82□□□□□ -1.8
ZNF48Q96MX3 AC136624.4-201ENST00000573044 370 ntBASIC3.82□□□□□ -1.8
ZNF48Q96MX3 RN7SL652P-201ENST00000577769 300 ntBASIC3.82□□□□□ -1.8
ZNF48Q96MX3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.82□□□□□ -1.8
ZNF48Q96MX3 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.82□□□□□ -1.8
ZNF48Q96MX3 AL356218.2-201ENST00000605264 187 ntBASIC3.82□□□□□ -1.8
ZNF48Q96MX3 Z98200.1-201ENST00000607298 470 ntBASIC3.82□□□□□ -1.8
ZNF48Q96MX3 uc_338.5-201ENST00000611839 155 ntBASIC3.82□□□□□ -1.8
ZNF48Q96MX3 DISC2.1-201ENST00000612827 205 ntBASIC3.82□□□□□ -1.8
ZNF48Q96MX3 RMST_7.1-201ENST00000621935 268 ntBASIC3.82□□□□□ -1.8
ZNF48Q96MX3 OR52H1-202ENST00000641796 1061 ntBASIC3.82□□□□□ -1.8
ZNF48Q96MX3 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ZNF48Q96MX3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
ZNF48Q96MX3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ZNF48Q96MX3 ZFRP1-201ENST00000457579 2970 ntBASIC3.82□□□□□ -1.8
ZNF48Q96MX3 AC027290.2-201ENST00000623210 18662 ntBASIC3.82□□□□□ -1.8
ZNF48Q96MX3 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.82□□□□□ -1.8
ZNF48Q96MX3 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
ZNF48Q96MX3 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AC108751.5-201ENST00000492880 1336 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 RNU6-456P-201ENST00000384493 107 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 RNU6-738P-201ENST00000384531 106 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 RNU6-952P-201ENST00000391164 108 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AL354719.1-201ENST00000406535 843 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 SNORA11-201ENST00000408789 128 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 RNU4-25P-201ENST00000410569 230 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 RNU6-1068P-201ENST00000410958 103 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AC140479.3-201ENST00000418944 1126 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 RPL35AP12-201ENST00000425362 338 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 RSL24D1P6-201ENST00000426934 401 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 RPL36P19-201ENST00000430744 301 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 CKS1BP5-201ENST00000434172 273 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 USP9YP7-201ENST00000436723 430 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 RPL7P28-201ENST00000437739 740 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AC016691.1-201ENST00000441321 413 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 USP9YP32-201ENST00000452432 430 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AC009963.2-201ENST00000453431 138 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AC079168.2-201ENST00000453977 416 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 RPL7P19-201ENST00000469948 618 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 TMEM251P1-201ENST00000503717 318 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AC108145.1-201ENST00000503770 153 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AC103851.1-201ENST00000506833 274 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 RN7SKP122-201ENST00000515923 296 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 SNORA40.12-201ENST00000516329 111 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 Vault.1-201ENST00000516474 102 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 RNU7-30P-201ENST00000516835 62 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AP001781.1-201ENST00000530977 207 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AC068831.4-201ENST00000556118 109 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AC007151.1-201ENST00000572774 483 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AL590392.1-201ENST00000604960 446 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AC116312.1-201ENST00000606841 314 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 MIR6830-201ENST00000636015 70 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AC100810.6-201ENST00000638068 285 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AC107081.3-201ENST00000612715 2034 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 AP001486.2-201ENST00000561652 5113 ntBASIC3.81□□□□□ -1.8
ZNF48Q96MX3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
ZNF48Q96MX3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
ZNF48Q96MX3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.8□□□□□ -1.8
ZNF48Q96MX3 AC139713.2-215ENST00000641428 5037 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ZNF48Q96MX3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.8□□□□□ -1.8
ZNF48Q96MX3 EXOC5P1-201ENST00000510543 1969 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
ZNF48Q96MX3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ZNF48Q96MX3 RNU5E-1-201ENST00000362477 120 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms