Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 RABEPKP1-201ENST00000440529 1026 ntBASIC4.17□□□□□ -1.74
CCDC138Q96M89 RPL36AP13-201ENST00000457490 317 ntBASIC4.17□□□□□ -1.74
CCDC138Q96M89 AC079804.1-201ENST00000461922 436 ntBASIC4.17□□□□□ -1.74
CCDC138Q96M89 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC138Q96M89 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC138Q96M89 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC138Q96M89 AC068305.1-201ENST00000497406 726 ntBASIC4.17□□□□□ -1.74
CCDC138Q96M89 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC138Q96M89 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC138Q96M89 AC109464.2-201ENST00000510242 943 ntBASIC4.17□□□□□ -1.74
CCDC138Q96M89 RNU2-46P-201ENST00000517038 113 ntBASIC4.17□□□□□ -1.74
CCDC138Q96M89 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC138Q96M89 AL360157.1-201ENST00000565962 87 ntBASIC4.17□□□□□ -1.74
CCDC138Q96M89 AC099489.2-201ENST00000574976 260 ntBASIC4.17□□□□□ -1.74
CCDC138Q96M89 MIR4528-201ENST00000577763 90 ntBASIC4.17□□□□□ -1.74
CCDC138Q96M89 AC006116.10-201ENST00000591836 581 ntBASIC4.17□□□□□ -1.74
CCDC138Q96M89 DUXAP4-201ENST00000603046 613 ntBASIC4.17□□□□□ -1.74
CCDC138Q96M89 AC008277.2-201ENST00000605196 797 ntBASIC4.17□□□□□ -1.74
CCDC138Q96M89 AP002826.1-201ENST00000608835 315 ntBASIC4.17□□□□□ -1.74
CCDC138Q96M89 AC091304.9-201ENST00000612091 226 ntBASIC4.17□□□□□ -1.74
CCDC138Q96M89 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC138Q96M89 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC138Q96M89 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC138Q96M89 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC138Q96M89 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC138Q96M89 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC138Q96M89 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC138Q96M89 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CCDC138Q96M89 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.16□□□□□ -1.74
CCDC138Q96M89 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC138Q96M89 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CCDC138Q96M89 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC138Q96M89 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC138Q96M89 RNY3P13-201ENST00000365542 102 ntBASIC4.16□□□□□ -1.74
CCDC138Q96M89 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CCDC138Q96M89 DEFB109C-201ENST00000382575 264 ntBASIC4.16□□□□□ -1.74
CCDC138Q96M89 DEFB109B-201ENST00000382656 264 ntBASIC4.16□□□□□ -1.74
CCDC138Q96M89 RNU6-1119P-201ENST00000384349 108 ntBASIC4.16□□□□□ -1.74
CCDC138Q96M89 Y_RNA.559-201ENST00000384686 107 ntBASIC4.16□□□□□ -1.74
CCDC138Q96M89 AL356967.1-201ENST00000406305 431 ntBASIC4.16□□□□□ -1.74
CCDC138Q96M89 RNU4-25P-201ENST00000410569 230 ntBASIC4.16□□□□□ -1.74
CCDC138Q96M89 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC138Q96M89 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC138Q96M89 AC073614.1-201ENST00000438690 650 ntBASIC4.16□□□□□ -1.74
CCDC138Q96M89 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC138Q96M89 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC138Q96M89 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC138Q96M89 GAPDHP17-201ENST00000449858 1001 ntBASIC4.16□□□□□ -1.74
CCDC138Q96M89 MTND1P12-201ENST00000455231 147 ntBASIC4.16□□□□□ -1.74
CCDC138Q96M89 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC138Q96M89 RPL9P32-201ENST00000464118 620 ntBASIC4.16□□□□□ -1.74
CCDC138Q96M89 AC007537.2-201ENST00000472093 511 ntBASIC4.16□□□□□ -1.74
CCDC138Q96M89 RN7SL481P-201ENST00000477764 299 ntBASIC4.16□□□□□ -1.74
CCDC138Q96M89 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC138Q96M89 AC091435.1-201ENST00000505442 584 ntBASIC4.16□□□□□ -1.74
CCDC138Q96M89 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC138Q96M89 AC105914.1-201ENST00000511798 226 ntBASIC4.16□□□□□ -1.74
CCDC138Q96M89 AC009643.1-201ENST00000532030 391 ntBASIC4.16□□□□□ -1.74
CCDC138Q96M89 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC138Q96M89 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC138Q96M89 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC138Q96M89 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC138Q96M89 AC105224.1-201ENST00000587055 421 ntBASIC4.16□□□□□ -1.74
CCDC138Q96M89 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC138Q96M89 AC103591.3-201ENST00000608684 209 ntBASIC4.16□□□□□ -1.74
CCDC138Q96M89 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC138Q96M89 PISRT1-201ENST00000626175 531 ntBASIC4.16□□□□□ -1.74
CCDC138Q96M89 AC110994.2-201ENST00000635481 492 ntBASIC4.16□□□□□ -1.74
CCDC138Q96M89 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC138Q96M89 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC138Q96M89 AL672296.1-201ENST00000427780 2158 ntBASIC4.16□□□□□ -1.74
CCDC138Q96M89 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC138Q96M89 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC138Q96M89 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC138Q96M89 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC138Q96M89 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
CCDC138Q96M89 MAPK10-253ENST00000641010 4072 ntBASIC4.15□□□□□ -1.74
CCDC138Q96M89 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC138Q96M89 EXOC5P1-201ENST00000510543 1969 ntBASIC4.15□□□□□ -1.74
CCDC138Q96M89 AL158163.1-201ENST00000603915 1649 ntBASIC4.15□□□□□ -1.74
CCDC138Q96M89 FAM35DP-201ENST00000323387 2712 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
CCDC138Q96M89 RNU5A-1-201ENST00000362698 116 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 U8.3-201ENST00000363321 132 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
CCDC138Q96M89 MIR1179-201ENST00000408703 91 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 RNA5SP107-201ENST00000411358 122 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 AC011933.1-201ENST00000413334 321 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC138Q96M89 HMGB3P23-201ENST00000414981 585 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 RPS15AP12-201ENST00000419498 388 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC138Q96M89 AC019097.1-201ENST00000424783 735 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC138Q96M89 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC138Q96M89 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC138Q96M89 AC119618.1-201ENST00000434191 222 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 AL031667.1-201ENST00000440222 725 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 AC005094.1-201ENST00000440420 368 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms