Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS50Q96JG6 AL049734.2-201ENST00000441066 616 ntBASIC4.12□□□□□ -1.75
VPS50Q96JG6 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS50Q96JG6 HMGN2P21-201ENST00000447764 270 ntBASIC4.12□□□□□ -1.75
VPS50Q96JG6 DHFRP3-201ENST00000455595 559 ntBASIC4.12□□□□□ -1.75
VPS50Q96JG6 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
VPS50Q96JG6 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS50Q96JG6 RBM43P1-201ENST00000476891 1081 ntBASIC4.12□□□□□ -1.75
VPS50Q96JG6 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS50Q96JG6 RPL35P6-201ENST00000490024 372 ntBASIC4.12□□□□□ -1.75
VPS50Q96JG6 AC017037.1-201ENST00000508460 471 ntBASIC4.12□□□□□ -1.75
VPS50Q96JG6 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS50Q96JG6 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS50Q96JG6 RNU4-60P-201ENST00000517239 135 ntBASIC4.12□□□□□ -1.75
VPS50Q96JG6 AC107934.1-201ENST00000522215 217 ntBASIC4.12□□□□□ -1.75
VPS50Q96JG6 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS50Q96JG6 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS50Q96JG6 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VPS50Q96JG6 AC068831.4-201ENST00000556118 109 ntBASIC4.12□□□□□ -1.75
VPS50Q96JG6 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.12□□□□□ -1.75
VPS50Q96JG6 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS50Q96JG6 AL451044.1-201ENST00000604867 238 ntBASIC4.12□□□□□ -1.75
VPS50Q96JG6 ARF4P1-201ENST00000605447 541 ntBASIC4.12□□□□□ -1.75
VPS50Q96JG6 AC055876.5-201ENST00000605667 259 ntBASIC4.12□□□□□ -1.75
VPS50Q96JG6 AC092954.2-201ENST00000609103 430 ntBASIC4.12□□□□□ -1.75
VPS50Q96JG6 AC124864.2-201ENST00000624736 186 ntBASIC4.12□□□□□ -1.75
VPS50Q96JG6 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
VPS50Q96JG6 EXOC5P1-201ENST00000510543 1969 ntBASIC4.12□□□□□ -1.75
VPS50Q96JG6 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS50Q96JG6 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS50Q96JG6 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS50Q96JG6 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS50Q96JG6 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS50Q96JG6 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VPS50Q96JG6 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS50Q96JG6 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VPS50Q96JG6 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS50Q96JG6 MIR383-201ENST00000362257 73 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 Y_RNA.296-201ENST00000364930 108 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VPS50Q96JG6 MIR659-201ENST00000384963 97 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
VPS50Q96JG6 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS50Q96JG6 GSTA9P-201ENST00000406231 611 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 Z98941.1-201ENST00000407764 100 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 AC245052.5-201ENST00000416320 649 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS50Q96JG6 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS50Q96JG6 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS50Q96JG6 AL139415.2-201ENST00000431968 163 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 UBE2V1P8-201ENST00000437166 265 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS50Q96JG6 AP1S2P1-201ENST00000457344 379 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 RPS7P7-201ENST00000463499 571 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 AC103987.1-201ENST00000473394 348 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 AC021382.1-201ENST00000483523 359 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 RPS3AP14-201ENST00000483907 780 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 AC105137.1-201ENST00000484355 562 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 AC091167.1-201ENST00000492017 396 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 NIPA2P2-201ENST00000496376 1083 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS50Q96JG6 MRPL49P2-201ENST00000521066 465 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS50Q96JG6 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS50Q96JG6 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.11□□□□□ -1.75
VPS50Q96JG6 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS50Q96JG6 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS50Q96JG6 BNIP3P5-201ENST00000562290 498 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 AL391840.1-201ENST00000571144 367 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS50Q96JG6 AC060771.1-201ENST00000582031 164 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 DUXAP4-201ENST00000603046 613 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 AC020910.2-201ENST00000603635 610 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 BX664608.1-201ENST00000610519 487 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS50Q96JG6 AC019278.1-201ENST00000623516 479 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 AC091953.2-201ENST00000623979 160 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS50Q96JG6 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
VPS50Q96JG6 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VPS50Q96JG6 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS50Q96JG6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS50Q96JG6 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS50Q96JG6 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS50Q96JG6 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS50Q96JG6 AC024560.2-201ENST00000507981 1497 ntBASIC4.11□□□□□ -1.75
VPS50Q96JG6 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS50Q96JG6 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS50Q96JG6 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS50Q96JG6 FRG1BP-201ENST00000278882 761 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS50Q96JG6 RNU5E-1-201ENST00000362477 120 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 RNU6-1283P-201ENST00000365314 105 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 SNORD6-201ENST00000365444 73 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 RNA5SP56-201ENST00000410277 118 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 RN7SKP235-201ENST00000410662 305 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 RNU4-78P-201ENST00000410940 126 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 RN7SKP263-201ENST00000411194 309 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms