Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHDQ96IW2 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHDQ96IW2 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.99□□□□□ -1.61
SHDQ96IW2 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHDQ96IW2 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.99□□□□□ -1.61
SHDQ96IW2 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SHDQ96IW2 Y_RNA.373-201ENST00000365600 103 ntBASIC4.99□□□□□ -1.61
SHDQ96IW2 RNU6-946P-201ENST00000383878 107 ntBASIC4.99□□□□□ -1.61
SHDQ96IW2 SOD2P1-201ENST00000396543 562 ntBASIC4.99□□□□□ -1.61
SHDQ96IW2 AL592114.1-201ENST00000403842 483 ntBASIC4.99□□□□□ -1.61
SHDQ96IW2 RNU4-25P-201ENST00000410569 230 ntBASIC4.99□□□□□ -1.61
SHDQ96IW2 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.99□□□□□ -1.61
SHDQ96IW2 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.99□□□□□ -1.61
SHDQ96IW2 SSXP9-201ENST00000417503 292 ntBASIC4.99□□□□□ -1.61
SHDQ96IW2 RPS12P23-201ENST00000419579 400 ntBASIC4.99□□□□□ -1.61
SHDQ96IW2 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.99□□□□□ -1.61
SHDQ96IW2 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.99□□□□□ -1.61
SHDQ96IW2 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.99□□□□□ -1.61
SHDQ96IW2 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.99□□□□□ -1.61
SHDQ96IW2 NUTF2P7-201ENST00000453086 375 ntBASIC4.99□□□□□ -1.61
SHDQ96IW2 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.99□□□□□ -1.61
SHDQ96IW2 RPL21P8-201ENST00000465083 535 ntBASIC4.99□□□□□ -1.61
SHDQ96IW2 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SHDQ96IW2 TRBV1-201ENST00000476502 284 ntBASIC4.99□□□□□ -1.61
SHDQ96IW2 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.99□□□□□ -1.61
SHDQ96IW2 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.99□□□□□ -1.61
SHDQ96IW2 SCARNA22-201ENST00000503991 125 ntBASIC4.99□□□□□ -1.61
SHDQ96IW2 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SHDQ96IW2 AL137161.1-201ENST00000532231 390 ntBASIC4.99□□□□□ -1.61
SHDQ96IW2 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.99□□□□□ -1.61
SHDQ96IW2 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.99□□□□□ -1.61
SHDQ96IW2 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.99□□□□□ -1.61
SHDQ96IW2 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.99□□□□□ -1.61
SHDQ96IW2 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.99□□□□□ -1.61
SHDQ96IW2 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.99□□□□□ -1.61
SHDQ96IW2 MIR3160-1-201ENST00000577972 85 ntBASIC4.99□□□□□ -1.61
SHDQ96IW2 MIR4742-201ENST00000581069 85 ntBASIC4.99□□□□□ -1.61
SHDQ96IW2 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.99□□□□□ -1.61
SHDQ96IW2 AC007998.5-201ENST00000622938 237 ntBASIC4.99□□□□□ -1.61
SHDQ96IW2 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.99□□□□□ -1.61
SHDQ96IW2 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
SHDQ96IW2 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SHDQ96IW2 AL365440.1-201ENST00000436135 2167 ntBASIC4.99□□□□□ -1.61
SHDQ96IW2 AC006026.1-201ENST00000444025 1803 ntBASIC4.99□□□□□ -1.61
SHDQ96IW2 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHDQ96IW2 OR56B2P-202ENST00000641377 2453 ntBASIC4.99□□□□□ -1.61
SHDQ96IW2 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SHDQ96IW2 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHDQ96IW2 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
SHDQ96IW2 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHDQ96IW2 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHDQ96IW2 AC004817.4-201ENST00000602396 3625 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHDQ96IW2 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHDQ96IW2 TPTE2P4-201ENST00000258589 1605 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
SHDQ96IW2 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.98□□□□□ -1.61
SHDQ96IW2 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.98□□□□□ -1.61
SHDQ96IW2 AC139769.1-204ENST00000472297 1931 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHDQ96IW2 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHDQ96IW2 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SHDQ96IW2 RNU6-1013P-201ENST00000384180 107 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 Y_RNA.530-201ENST00000384587 101 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 MIR124-3-201ENST00000384866 87 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 MIR23A-201ENST00000385245 73 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SHDQ96IW2 RNU6-882P-201ENST00000391025 103 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 SNORA57.1-201ENST00000391227 145 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 RNA5SP397-201ENST00000391323 118 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHDQ96IW2 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SHDQ96IW2 PPP1R11P2-201ENST00000423543 382 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 RPL7P46-201ENST00000425129 740 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SHDQ96IW2 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.98□□□□□ -1.61
SHDQ96IW2 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.98□□□□□ -1.61
SHDQ96IW2 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.98□□□□□ -1.61
SHDQ96IW2 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.98□□□□□ -1.61
SHDQ96IW2 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.98□□□□□ -1.61
SHDQ96IW2 PPP1R2P5-201ENST00000457256 603 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 AC010618.1-201ENST00000469924 477 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 RN7SL817P-201ENST00000480777 288 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.98□□□□□ -1.61
SHDQ96IW2 HMGN1P13-201ENST00000505795 138 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 Y_RNA.665-201ENST00000516177 98 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 RPL7P20-201ENST00000520308 745 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.98□□□□□ -1.61
SHDQ96IW2 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.98□□□□□ -1.61
SHDQ96IW2 OR4H12P-201ENST00000556269 907 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.98□□□□□ -1.61
SHDQ96IW2 AC069061.3-201ENST00000582254 823 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 MIR4424-201ENST00000585257 86 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 HMGB2P1-201ENST00000591146 634 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 AC006116.10-201ENST00000591836 581 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.98□□□□□ -1.61
SHDQ96IW2 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.98□□□□□ -1.61
SHDQ96IW2 MIR6839-201ENST00000620425 113 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms