Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
FOXRED1Q96CU9 AC126177.3-201ENST00000551839 688 ntBASIC4.37□□□□□ -1.71
FOXRED1Q96CU9 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXRED1Q96CU9 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
FOXRED1Q96CU9 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXRED1Q96CU9 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
FOXRED1Q96CU9 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.37□□□□□ -1.71
FOXRED1Q96CU9 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.37□□□□□ -1.71
FOXRED1Q96CU9 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.37□□□□□ -1.71
FOXRED1Q96CU9 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXRED1Q96CU9 AL512329.2-201ENST00000607350 548 ntBASIC4.37□□□□□ -1.71
FOXRED1Q96CU9 PART1_1.1-201ENST00000611761 217 ntBASIC4.37□□□□□ -1.71
FOXRED1Q96CU9 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXRED1Q96CU9 AL450472.3-201ENST00000615578 367 ntBASIC4.37□□□□□ -1.71
FOXRED1Q96CU9 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXRED1Q96CU9 AL357559.1-201ENST00000622228 274 ntBASIC4.37□□□□□ -1.71
FOXRED1Q96CU9 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.37□□□□□ -1.71
FOXRED1Q96CU9 AC007998.5-201ENST00000622938 237 ntBASIC4.37□□□□□ -1.71
FOXRED1Q96CU9 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
FOXRED1Q96CU9 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.37□□□□□ -1.71
FOXRED1Q96CU9 MAPK10-286ENST00000641208 8747 ntBASIC4.37□□□□□ -1.71
FOXRED1Q96CU9 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.37□□□□□ -1.71
FOXRED1Q96CU9 AL442639.1-201ENST00000625030 1899 ntBASIC4.37□□□□□ -1.71
FOXRED1Q96CU9 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.37□□□□□ -1.71
FOXRED1Q96CU9 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
FOXRED1Q96CU9 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 AL645937.1-201ENST00000641739 1652 ntBASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 AC121333.1-201ENST00000567488 2709 ntBASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 SNORA73.1-201ENST00000363107 205 ntBASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 Y_RNA.315-201ENST00000365117 102 ntBASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 Y_RNA.419-201ENST00000384041 102 ntBASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 AL080315.1-201ENST00000406055 466 ntBASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 RAB28P1-201ENST00000411517 641 ntBASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 RPL30P2-201ENST00000414021 291 ntBASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 AL354751.2-201ENST00000415471 210 ntBASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 CYCSP43-201ENST00000438233 310 ntBASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 Z92846.1-201ENST00000456203 268 ntBASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 Y_RNA.632-201ENST00000459189 102 ntBASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 RN7SL30P-201ENST00000488416 306 ntBASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 RNU6-1038P-201ENST00000516516 104 ntBASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 CYCSP40-201ENST00000575927 294 ntBASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 SNORD84-203ENST00000584275 78 ntBASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 AC087783.2-201ENST00000605070 562 ntBASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 AL133255.1-201ENST00000606374 441 ntBASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 uc_338.15-201ENST00000615470 191 ntBASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
FOXRED1Q96CU9 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 MTND5P3-201ENST00000438536 1800 ntBASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 RNA5SP183-201ENST00000362452 119 ntBASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 MIR600-201ENST00000385007 98 ntBASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 AC110754.1-201ENST00000399740 601 ntBASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 RNU4-34P-201ENST00000410431 124 ntBASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 GJA6P-201ENST00000415117 1042 ntBASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 AC108075.1-201ENST00000424692 529 ntBASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 RPL7L1P9-201ENST00000431298 745 ntBASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 FABP5P13-201ENST00000452144 328 ntBASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 AL445433.1-201ENST00000457507 257 ntBASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 RN7SL517P-201ENST00000462240 305 ntBASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 AC010350.1-201ENST00000504908 231 ntBASIC4.35□□□□□ -1.71
FOXRED1Q96CU9 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms