Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 AC008432.1-201ENST00000615912 1320 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 RNU6-609P-201ENST00000365459 107 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 SNORA3.2-201ENST00000408221 125 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 TRGV6-201ENST00000417928 299 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 RPS6P14-201ENST00000425165 719 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 DEFB130D-201ENST00000426866 237 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 AL158053.1-201ENST00000441503 453 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 AC092902.1-201ENST00000486999 259 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 LINC00888-204ENST00000487386 421 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 AC104629.1-201ENST00000494226 508 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 AP001317.1-201ENST00000531194 960 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 POLR2KP1-201ENST00000553226 168 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 AC124283.4-201ENST00000581815 456 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 BNIP3P31-201ENST00000604515 566 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 RNU6-77P-201ENST00000410554 91 ntBASIC2.42□□□□□ -2.02
SHROOM3Q8TF72 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.42□□□□□ -2.02
SHROOM3Q8TF72 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.42□□□□□ -2.02
SHROOM3Q8TF72 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.42□□□□□ -2.02
SHROOM3Q8TF72 AL590762.3-201ENST00000436372 640 ntBASIC2.42□□□□□ -2.02
SHROOM3Q8TF72 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.42□□□□□ -2.02
SHROOM3Q8TF72 AC008427.1-201ENST00000503102 655 ntBASIC2.42□□□□□ -2.02
SHROOM3Q8TF72 MTATP6P22-201ENST00000507369 598 ntBASIC2.42□□□□□ -2.02
SHROOM3Q8TF72 SNORD116-26-201ENST00000516006 96 ntBASIC2.42□□□□□ -2.02
SHROOM3Q8TF72 RNU6-347P-201ENST00000516658 105 ntBASIC2.42□□□□□ -2.02
SHROOM3Q8TF72 AADACP1-206ENST00000561502 1193 ntBASIC2.42□□□□□ -2.02
SHROOM3Q8TF72 SUMO2P14-201ENST00000604488 293 ntBASIC2.42□□□□□ -2.02
SHROOM3Q8TF72 XIST_intron.1-201ENST00000619444 68 ntBASIC2.42□□□□□ -2.02
SHROOM3Q8TF72 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.42□□□□□ -2.02
SHROOM3Q8TF72 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
SHROOM3Q8TF72 AP001148.1-201ENST00000624124 2359 ntBASIC2.42□□□□□ -2.02
SHROOM3Q8TF72 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 MIR21-201ENST00000362134 72 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 HSPE1P26-201ENST00000405341 275 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AC246680.2-201ENST00000422106 389 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 ARL5AP2-201ENST00000444698 533 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 RPL7P52-201ENST00000449200 742 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 RNU6-1218P-201ENST00000458990 108 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 XKRY-201ENST00000510392 1100 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AC026412.2-201ENST00000512270 1075 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 RN7SKP96-201ENST00000516948 297 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 RNU6-548P-201ENST00000517083 115 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AC123904.3-201ENST00000547218 814 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AC124016.2-201ENST00000610058 665 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AC004925.1-201ENST00000624256 2706 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AC091152.2-201ENST00000591628 2569 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 RNU6-452P-201ENST00000384406 107 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 MIR518C-201ENST00000384822 101 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 RNA5SP213-201ENST00000391031 106 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AL355615.1-201ENST00000406187 641 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 YWHAZP8-201ENST00000436935 731 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 TPMTP4-201ENST00000450749 678 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 GAPDHP39-201ENST00000481866 979 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AC012170.1-201ENST00000495139 359 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AC021269.2-201ENST00000532318 330 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AC005951.1-201ENST00000576706 485 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AC090330.1-201ENST00000588646 764 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AL356575.1-201ENST00000603008 283 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 RNU6-1192P-201ENST00000612197 107 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AC005156.1-201ENST00000613371 573 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AL110115.1-201ENST00000614396 364 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 RNU6-489P-201ENST00000618289 107 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 AL512427.1-201ENST00000618593 349 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 GABPAP-201ENST00000419271 1356 ntBASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SHROOM3Q8TF72 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
SHROOM3Q8TF72 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.4□□□□□ -2.02
SHROOM3Q8TF72 MTATP6P31-201ENST00000406985 692 ntBASIC2.4□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms