Protein–RNA interactions for Protein: Q8TEQ0

SNX29, Sorting nexin-29, humanhuman

Predictions only

Length 813 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29Q8TEQ0 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNX29Q8TEQ0 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX29Q8TEQ0 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX29Q8TEQ0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX29Q8TEQ0 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX29Q8TEQ0 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX29Q8TEQ0 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX29Q8TEQ0 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
SNX29Q8TEQ0 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX29Q8TEQ0 SMG1P4-204ENST00000523028 4131 ntBASIC5.55□□□□□ -1.52
SNX29Q8TEQ0 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 AL359922.3-201ENST00000624779 1670 ntBASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 RN7SKP95-201ENST00000362860 303 ntBASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 Y_RNA.148-201ENST00000363557 117 ntBASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 Y_RNA.212-201ENST00000364177 102 ntBASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 AC117470.1-201ENST00000381974 330 ntBASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 MIR105-2-201ENST00000385083 81 ntBASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 AC005522.1-201ENST00000395416 346 ntBASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 AL139397.2-201ENST00000404529 772 ntBASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 RPL21P24-201ENST00000413752 448 ntBASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 UBE2FP1-201ENST00000416536 447 ntBASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 RPS15AP27-201ENST00000449183 343 ntBASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 RPL21P93-201ENST00000480465 489 ntBASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 RN7SL432P-201ENST00000484057 298 ntBASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 HMGB1P19-201ENST00000517578 577 ntBASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 IGKV2D-36-201ENST00000518643 226 ntBASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 RPL23AP53-201ENST00000521854 457 ntBASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 AP001922.4-201ENST00000526967 290 ntBASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 AC044860.2-201ENST00000561005 179 ntBASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 AC106782.4-201ENST00000568264 210 ntBASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 AC007938.3-201ENST00000604965 623 ntBASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 AC012409.4-201ENST00000612923 249 ntBASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 AC090510.2-201ENST00000617465 629 ntBASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 AC103705.1-201ENST00000619013 241 ntBASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 AL445363.3-201ENST00000623080 671 ntBASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SNX29Q8TEQ0 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 XIAPP3-201ENST00000312918 795 ntBASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 RN7SKP104-201ENST00000362605 328 ntBASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 RNA5SP123-201ENST00000363244 119 ntBASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 RNU6-1284P-201ENST00000363701 100 ntBASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 MT-TC-201ENST00000387405 66 ntBASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 AL645927.1-201ENST00000396783 406 ntBASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 AL357515.1-201ENST00000402967 542 ntBASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 RPL30P3-201ENST00000424262 333 ntBASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 CALM2P2-201ENST00000428512 440 ntBASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 AC093414.1-201ENST00000434712 514 ntBASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 TXNP1-201ENST00000441872 371 ntBASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 AC000111.2-201ENST00000448200 210 ntBASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 AC234775.1-201ENST00000454247 670 ntBASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 AC007967.1-201ENST00000455422 1159 ntBASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 RN7SL97P-201ENST00000486780 299 ntBASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 AC004453.1-201ENST00000487895 408 ntBASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 PTP4A1P6-201ENST00000531034 478 ntBASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 AC005868.1-201ENST00000536421 331 ntBASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 AC068870.2-201ENST00000620635 389 ntBASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 AL589994.2-201ENST00000621124 579 ntBASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 AC091905.4-201ENST00000623432 202 ntBASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 AC009643.2-201ENST00000603543 1448 ntBASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms