Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 AC007677.1-201ENST00000445757 515 ntBASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 AC016696.1-201ENST00000446949 318 ntBASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 AC017037.2-201ENST00000513850 890 ntBASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 MIR4472-2-201ENST00000582069 67 ntBASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 MIR3939-201ENST00000582614 106 ntBASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 AC010928.3-201ENST00000587712 541 ntBASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 AL031666.3-201ENST00000609320 1006 ntBASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 AC090617.10-201ENST00000624308 134 ntBASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 MTCO1P9-201ENST00000505577 1534 ntBASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 AC126323.6-202ENST00000568092 3511 ntBASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 ASNSP3-201ENST00000451989 1306 ntBASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.7□□□□□ -1.66
SH3RF2Q8TEC5 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 MTND4P35-201ENST00000604257 1375 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 Y_RNA.100-201ENST00000363141 102 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 SNORA63-201ENST00000363450 132 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 Y_RNA.231-201ENST00000364358 102 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 RNU6-432P-201ENST00000384196 109 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 RNU6-821P-201ENST00000390995 107 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 RNU2-29P-201ENST00000410423 189 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 CYCSP10-201ENST00000417973 294 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 OR1AA1P-201ENST00000419597 916 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 MTCYBP8-201ENST00000422855 651 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 SAR1AP4-201ENST00000429225 591 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 RPS29P17-201ENST00000430795 166 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 RPL36AP6-201ENST00000435770 321 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 MTND3P16-201ENST00000452205 344 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 AC007547.1-201ENST00000462177 490 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 HMGN2P26-201ENST00000463169 339 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 RN7SL303P-201ENST00000469773 251 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 RN7SL810P-201ENST00000493031 276 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 SNORD116-26-201ENST00000516006 96 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 RNU6-1314P-201ENST00000517139 104 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 BTF3P12-201ENST00000519620 469 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 PSMA2P1-201ENST00000526365 646 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 PTP4A1P6-201ENST00000531034 478 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 AL133271.1-201ENST00000538229 291 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 PSMA3P-201ENST00000555485 635 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 NCAPGP2-201ENST00000557911 754 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 MIR3138-201ENST00000585238 82 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 AP001029.3-201ENST00000588063 596 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 AC020910.2-201ENST00000603635 610 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 AL121992.2-201ENST00000606262 256 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 AC091979.2-201ENST00000607514 214 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 AC020634.1-201ENST00000608701 549 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 AC126177.8-201ENST00000618339 1015 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 RMST_7.1-201ENST00000621935 268 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 AC040168.1-201ENST00000623594 991 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.69□□□□□ -1.66
SH3RF2Q8TEC5 ZNF33CP-201ENST00000432492 2030 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms