Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 AC244100.1-202ENST00000621554 382 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC068787.1-201ENST00000623908 691 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 AP001002.2-201ENST00000625137 386 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.87□□□□□ -1.95
SKA3Q8IX90 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SKA3Q8IX90 MTND5P24-201ENST00000438892 1767 ntBASIC2.87□□□□□ -1.95
SKA3Q8IX90 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
SKA3Q8IX90 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SKA3Q8IX90 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.86□□□□□ -1.95
SKA3Q8IX90 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SKA3Q8IX90 AL353743.1-202ENST00000431724 1695 ntBASIC2.86□□□□□ -1.95
SKA3Q8IX90 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
SKA3Q8IX90 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SKA3Q8IX90 U8.9-201ENST00000365667 134 ntBASIC2.86□□□□□ -1.95
SKA3Q8IX90 MIR513B-201ENST00000385136 84 ntBASIC2.86□□□□□ -1.95
SKA3Q8IX90 SAR1AP2-201ENST00000392696 594 ntBASIC2.86□□□□□ -1.95
SKA3Q8IX90 AC063979.1-201ENST00000415539 377 ntBASIC2.86□□□□□ -1.95
SKA3Q8IX90 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SKA3Q8IX90 TIMM9P2-201ENST00000419324 266 ntBASIC2.86□□□□□ -1.95
SKA3Q8IX90 AL139421.1-201ENST00000423010 169 ntBASIC2.86□□□□□ -1.95
SKA3Q8IX90 COX7BP2-201ENST00000437976 242 ntBASIC2.86□□□□□ -1.95
SKA3Q8IX90 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.86□□□□□ -1.95
SKA3Q8IX90 RPL21P2-201ENST00000440049 481 ntBASIC2.86□□□□□ -1.95
SKA3Q8IX90 FGF7P5-201ENST00000441829 291 ntBASIC2.86□□□□□ -1.95
SKA3Q8IX90 COX6CP2-201ENST00000444980 225 ntBASIC2.86□□□□□ -1.95
SKA3Q8IX90 SSXP4-201ENST00000451349 245 ntBASIC2.86□□□□□ -1.95
SKA3Q8IX90 snoU109.4-201ENST00000458953 143 ntBASIC2.86□□□□□ -1.95
SKA3Q8IX90 snoU13.24-201ENST00000458998 104 ntBASIC2.86□□□□□ -1.95
SKA3Q8IX90 AC091153.1-201ENST00000466297 402 ntBASIC2.86□□□□□ -1.95
SKA3Q8IX90 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SKA3Q8IX90 HSPD1P15-201ENST00000505573 1122 ntBASIC2.86□□□□□ -1.95
SKA3Q8IX90 AC021146.8-201ENST00000507455 733 ntBASIC2.86□□□□□ -1.95
SKA3Q8IX90 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.86□□□□□ -1.95
SKA3Q8IX90 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.86□□□□□ -1.95
SKA3Q8IX90 AC010587.2-201ENST00000511727 448 ntBASIC2.86□□□□□ -1.95
SKA3Q8IX90 AC006499.2-201ENST00000513470 337 ntBASIC2.86□□□□□ -1.95
SKA3Q8IX90 AP001372.4-201ENST00000524889 472 ntBASIC2.86□□□□□ -1.95
SKA3Q8IX90 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.86□□□□□ -1.95
SKA3Q8IX90 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.86□□□□□ -1.95
SKA3Q8IX90 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.86□□□□□ -1.95
SKA3Q8IX90 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.86□□□□□ -1.95
SKA3Q8IX90 AC087481.2-201ENST00000565492 330 ntBASIC2.86□□□□□ -1.95
SKA3Q8IX90 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.86□□□□□ -1.95
SKA3Q8IX90 AC080013.3-201ENST00000606839 578 ntBASIC2.86□□□□□ -1.95
SKA3Q8IX90 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.86□□□□□ -1.95
SKA3Q8IX90 AL392048.1-201ENST00000613946 534 ntBASIC2.86□□□□□ -1.95
SKA3Q8IX90 AC004009.2-201ENST00000623016 728 ntBASIC2.86□□□□□ -1.95
SKA3Q8IX90 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.86□□□□□ -1.95
SKA3Q8IX90 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.86□□□□□ -1.95
SKA3Q8IX90 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.86□□□□□ -1.95
SKA3Q8IX90 AC004925.1-201ENST00000624256 2706 ntBASIC2.86□□□□□ -1.95
SKA3Q8IX90 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SKA3Q8IX90 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SKA3Q8IX90 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
SKA3Q8IX90 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.85□□□□□ -1.95
SKA3Q8IX90 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SKA3Q8IX90 AC093831.2-201ENST00000624393 3427 ntBASIC2.85□□□□□ -1.95
SKA3Q8IX90 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.85□□□□□ -1.95
SKA3Q8IX90 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
SKA3Q8IX90 ANAPC10P1-201ENST00000395991 556 ntBASIC2.85□□□□□ -1.95
SKA3Q8IX90 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.85□□□□□ -1.95
SKA3Q8IX90 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.85□□□□□ -1.95
SKA3Q8IX90 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.85□□□□□ -1.95
SKA3Q8IX90 AC006960.1-201ENST00000419980 153 ntBASIC2.85□□□□□ -1.95
SKA3Q8IX90 OR2AS1P-201ENST00000427827 319 ntBASIC2.85□□□□□ -1.95
SKA3Q8IX90 AC079780.1-201ENST00000428259 207 ntBASIC2.85□□□□□ -1.95
SKA3Q8IX90 AC005300.1-201ENST00000428401 373 ntBASIC2.85□□□□□ -1.95
SKA3Q8IX90 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.85□□□□□ -1.95
SKA3Q8IX90 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.85□□□□□ -1.95
SKA3Q8IX90 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SKA3Q8IX90 RPS25P9-201ENST00000435591 252 ntBASIC2.85□□□□□ -1.95
SKA3Q8IX90 MTCO2P20-201ENST00000437339 673 ntBASIC2.85□□□□□ -1.95
SKA3Q8IX90 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.85□□□□□ -1.95
SKA3Q8IX90 MTND4P6-201ENST00000438297 472 ntBASIC2.85□□□□□ -1.95
SKA3Q8IX90 CR769776.1-201ENST00000441254 787 ntBASIC2.85□□□□□ -1.95
SKA3Q8IX90 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.85□□□□□ -1.95
SKA3Q8IX90 AC093392.2-201ENST00000450682 337 ntBASIC2.85□□□□□ -1.95
SKA3Q8IX90 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.85□□□□□ -1.95
SKA3Q8IX90 SUMO2P2-201ENST00000456482 255 ntBASIC2.85□□□□□ -1.95
SKA3Q8IX90 RPL21P104-201ENST00000464143 478 ntBASIC2.85□□□□□ -1.95
SKA3Q8IX90 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SKA3Q8IX90 AC108729.1-201ENST00000487812 947 ntBASIC2.85□□□□□ -1.95
SKA3Q8IX90 AC023424.2-201ENST00000493479 777 ntBASIC2.85□□□□□ -1.95
SKA3Q8IX90 AC090453.1-201ENST00000495560 436 ntBASIC2.85□□□□□ -1.95
SKA3Q8IX90 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.85□□□□□ -1.95
SKA3Q8IX90 MTCO2P32-201ENST00000514865 403 ntBASIC2.85□□□□□ -1.95
SKA3Q8IX90 AC110760.3-202ENST00000515177 371 ntBASIC2.85□□□□□ -1.95
SKA3Q8IX90 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.85□□□□□ -1.95
SKA3Q8IX90 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SKA3Q8IX90 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SKA3Q8IX90 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.85□□□□□ -1.95
SKA3Q8IX90 MTND4P33-201ENST00000556706 766 ntBASIC2.85□□□□□ -1.95
SKA3Q8IX90 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.85□□□□□ -1.95
SKA3Q8IX90 RPL21P12-201ENST00000559810 515 ntBASIC2.85□□□□□ -1.95
SKA3Q8IX90 AL157394.1-201ENST00000562983 1224 ntBASIC2.85□□□□□ -1.95
SKA3Q8IX90 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.85□□□□□ -1.95
SKA3Q8IX90 AC078899.3-201ENST00000599065 212 ntBASIC2.85□□□□□ -1.95
SKA3Q8IX90 CKS1BP3-201ENST00000600888 237 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms