Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 OR4T1P-201ENST00000554933 911 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.25□□□□□ -1.73
VRK3Q8IV63 MIR4277-201ENST00000578298 84 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.25□□□□□ -1.73
VRK3Q8IV63 SNRPGP17-201ENST00000603780 214 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 AL356218.2-201ENST00000605264 187 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.25□□□□□ -1.73
VRK3Q8IV63 AL606537.1-201ENST00000607258 2011 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 AC103710.3-201ENST00000608157 948 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 AL133215.3-201ENST00000609801 448 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 AC104237.2-201ENST00000612456 443 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 AC040896.1-201ENST00000613819 479 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 AC090971.5-201ENST00000621102 293 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VRK3Q8IV63 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.25□□□□□ -1.73
VRK3Q8IV63 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.25□□□□□ -1.73
VRK3Q8IV63 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.25□□□□□ -1.73
VRK3Q8IV63 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VRK3Q8IV63 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
VRK3Q8IV63 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
VRK3Q8IV63 AC092447.10-201ENST00000620607 1652 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.25□□□□□ -1.73
VRK3Q8IV63 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
VRK3Q8IV63 EIF2AP4-201ENST00000424793 1781 ntBASIC4.25□□□□□ -1.73
VRK3Q8IV63 OR4G1P-203ENST00000641984 1631 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VRK3Q8IV63 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
VRK3Q8IV63 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.24□□□□□ -1.73
VRK3Q8IV63 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
VRK3Q8IV63 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
VRK3Q8IV63 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VRK3Q8IV63 AC067945.1-201ENST00000342609 618 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 Y_RNA.145-201ENST00000363527 102 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 Y_RNA.255-201ENST00000364581 97 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 SNORA4.3-201ENST00000365564 137 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 RNU6-43P-201ENST00000384302 107 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 AL031679.1-201ENST00000400616 525 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 PRRC2CP1-201ENST00000404428 159 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 AL133384.1-201ENST00000412744 351 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 AC009237.10-201ENST00000414112 510 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.24□□□□□ -1.73
VRK3Q8IV63 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.24□□□□□ -1.73
VRK3Q8IV63 RPL12P34-201ENST00000424532 479 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.24□□□□□ -1.73
VRK3Q8IV63 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.24□□□□□ -1.73
VRK3Q8IV63 GPM6BP2-201ENST00000432046 144 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 AC011998.1-201ENST00000433403 117 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 RPL23AP74-201ENST00000437246 471 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.24□□□□□ -1.73
VRK3Q8IV63 GPM6BP1-201ENST00000446387 144 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.24□□□□□ -1.73
VRK3Q8IV63 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.24□□□□□ -1.73
VRK3Q8IV63 AC005229.2-201ENST00000456995 399 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 RN7SL41P-201ENST00000476144 297 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.24□□□□□ -1.73
VRK3Q8IV63 AL163973.1-201ENST00000484753 577 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 EIF4EP3-201ENST00000498782 656 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.24□□□□□ -1.73
VRK3Q8IV63 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.24□□□□□ -1.73
VRK3Q8IV63 TMEM248P1-201ENST00000510579 951 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 RNU4-49P-201ENST00000516080 140 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.24□□□□□ -1.73
VRK3Q8IV63 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.24□□□□□ -1.73
VRK3Q8IV63 AC100770.1-201ENST00000532310 322 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 AC005668.1-201ENST00000571142 476 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.24□□□□□ -1.73
VRK3Q8IV63 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.24□□□□□ -1.73
VRK3Q8IV63 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 AL355472.4-201ENST00000610233 626 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.24□□□□□ -1.73
VRK3Q8IV63 AL354950.2-201ENST00000617939 290 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 AL445363.3-201ENST00000623080 671 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 AC011944.2-201ENST00000624440 683 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 MIR7641-1-201ENST00000627518 61 ntBASIC4.24□□□□□ -1.73
VRK3Q8IV63 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.24□□□□□ -1.73
VRK3Q8IV63 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VRK3Q8IV63 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
VRK3Q8IV63 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VRK3Q8IV63 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
VRK3Q8IV63 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VRK3Q8IV63 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
VRK3Q8IV63 NACAP2-201ENST00000318548 624 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 Y_RNA.146-201ENST00000363549 102 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 RNA5SP28-201ENST00000363841 119 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 Y_RNA.202-201ENST00000364083 110 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 RNA5SP509-201ENST00000364577 119 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 SNORA51.6-201ENST00000384151 125 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 RNU6-606P-201ENST00000384721 111 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 Y_RNA.579-201ENST00000390939 94 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VRK3Q8IV63 EIF5P1-201ENST00000400019 1231 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 HDGFP1-201ENST00000405943 252 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 RNU2-9P-201ENST00000410194 145 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.23□□□□□ -1.73
VRK3Q8IV63 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 AC127526.1-201ENST00000417526 366 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 OR1AA1P-201ENST00000419597 916 ntBASIC4.23□□□□□ -1.73
VRK3Q8IV63 MTCYBP8-201ENST00000422855 651 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 561.4 ms