Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RNF20Q5VTR2 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.16□□□□□ -1.42
RNF20Q5VTR2 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.16□□□□□ -1.42
RNF20Q5VTR2 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RNF20Q5VTR2 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.16□□□□□ -1.42
RNF20Q5VTR2 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
RNF20Q5VTR2 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
RNF20Q5VTR2 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
RNF20Q5VTR2 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC6.16□□□□□ -1.42
RNF20Q5VTR2 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RNF20Q5VTR2 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
RNF20Q5VTR2 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RNF20Q5VTR2 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.15□□□□□ -1.42
RNF20Q5VTR2 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
RNF20Q5VTR2 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.15□□□□□ -1.42
RNF20Q5VTR2 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.15□□□□□ -1.42
RNF20Q5VTR2 RN7SKP162-201ENST00000363605 345 ntBASIC6.15□□□□□ -1.42
RNF20Q5VTR2 RN7SKP113-201ENST00000363891 295 ntBASIC6.15□□□□□ -1.42
RNF20Q5VTR2 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
RNF20Q5VTR2 RNU6-387P-201ENST00000411331 105 ntBASIC6.15□□□□□ -1.42
RNF20Q5VTR2 RNU6-516P-201ENST00000411381 104 ntBASIC6.15□□□□□ -1.42
RNF20Q5VTR2 EI24P4-201ENST00000423683 1078 ntBASIC6.15□□□□□ -1.42
RNF20Q5VTR2 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.15□□□□□ -1.42
RNF20Q5VTR2 COX6CP13-201ENST00000428703 226 ntBASIC6.15□□□□□ -1.42
RNF20Q5VTR2 HIGD1AP11-201ENST00000438361 280 ntBASIC6.15□□□□□ -1.42
RNF20Q5VTR2 RPS17P13-201ENST00000448974 407 ntBASIC6.15□□□□□ -1.42
RNF20Q5VTR2 HMGB3P30-201ENST00000457863 606 ntBASIC6.15□□□□□ -1.42
RNF20Q5VTR2 AC245028.2-201ENST00000458673 253 ntBASIC6.15□□□□□ -1.42
RNF20Q5VTR2 RPS21P4-201ENST00000487122 248 ntBASIC6.15□□□□□ -1.42
RNF20Q5VTR2 AC116655.1-201ENST00000508324 901 ntBASIC6.15□□□□□ -1.42
RNF20Q5VTR2 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC6.15□□□□□ -1.42
RNF20Q5VTR2 AP000827.1-201ENST00000527814 258 ntBASIC6.15□□□□□ -1.42
RNF20Q5VTR2 AC022882.1-201ENST00000532142 501 ntBASIC6.15□□□□□ -1.42
RNF20Q5VTR2 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.15□□□□□ -1.42
RNF20Q5VTR2 AC090115.3-201ENST00000553218 849 ntBASIC6.15□□□□□ -1.42
RNF20Q5VTR2 AC127381.1-201ENST00000555979 939 ntBASIC6.15□□□□□ -1.42
RNF20Q5VTR2 AL121576.1-201ENST00000556055 276 ntBASIC6.15□□□□□ -1.42
RNF20Q5VTR2 AC006272.2-201ENST00000594725 163 ntBASIC6.15□□□□□ -1.42
RNF20Q5VTR2 IMMP1LP3-201ENST00000604197 224 ntBASIC6.15□□□□□ -1.42
RNF20Q5VTR2 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.15□□□□□ -1.42
RNF20Q5VTR2 AC243312.2-201ENST00000623340 601 ntBASIC6.15□□□□□ -1.42
RNF20Q5VTR2 AC067931.1-201ENST00000624190 671 ntBASIC6.15□□□□□ -1.42
RNF20Q5VTR2 MIR4302-201ENST00000638058 60 ntBASIC6.15□□□□□ -1.42
RNF20Q5VTR2 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
RNF20Q5VTR2 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.15□□□□□ -1.43
RNF20Q5VTR2 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RNF20Q5VTR2 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
RNF20Q5VTR2 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RNF20Q5VTR2 GABPAP-201ENST00000419271 1356 ntBASIC6.15□□□□□ -1.43
RNF20Q5VTR2 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
RNF20Q5VTR2 Z95327.2-201ENST00000414579 1873 ntBASIC6.15□□□□□ -1.43
RNF20Q5VTR2 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RNF20Q5VTR2 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RNF20Q5VTR2 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.15□□□□□ -1.43
RNF20Q5VTR2 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RNF20Q5VTR2 AC104118.1-201ENST00000607625 1589 ntBASIC6.14□□□□□ -1.43
RNF20Q5VTR2 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6.14□□□□□ -1.43
RNF20Q5VTR2 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RNF20Q5VTR2 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
RNF20Q5VTR2 AC104260.2-201ENST00000623551 3497 ntBASIC6.14□□□□□ -1.43
RNF20Q5VTR2 AL445437.1-201ENST00000623157 3087 ntBASIC6.14□□□□□ -1.43
RNF20Q5VTR2 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.14□□□□□ -1.43
RNF20Q5VTR2 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RNF20Q5VTR2 Y_RNA.396-201ENST00000383949 103 ntBASIC6.14□□□□□ -1.43
RNF20Q5VTR2 Y_RNA.493-201ENST00000384422 102 ntBASIC6.14□□□□□ -1.43
RNF20Q5VTR2 AL583834.1-201ENST00000406943 343 ntBASIC6.14□□□□□ -1.43
RNF20Q5VTR2 RN7SKP206-201ENST00000410823 293 ntBASIC6.14□□□□□ -1.43
RNF20Q5VTR2 AC007738.1-201ENST00000413892 348 ntBASIC6.14□□□□□ -1.43
RNF20Q5VTR2 EZH2P1-201ENST00000431167 291 ntBASIC6.14□□□□□ -1.43
RNF20Q5VTR2 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.14□□□□□ -1.43
RNF20Q5VTR2 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.14□□□□□ -1.43
RNF20Q5VTR2 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.14□□□□□ -1.43
RNF20Q5VTR2 RPL22P13-201ENST00000493291 347 ntBASIC6.14□□□□□ -1.43
RNF20Q5VTR2 FTH1P24-201ENST00000503502 462 ntBASIC6.14□□□□□ -1.43
RNF20Q5VTR2 AC021146.3-201ENST00000511911 260 ntBASIC6.14□□□□□ -1.43
RNF20Q5VTR2 SCARNA16.2-201ENST00000516520 172 ntBASIC6.14□□□□□ -1.43
RNF20Q5VTR2 AC124068.1-201ENST00000563131 678 ntBASIC6.14□□□□□ -1.43
RNF20Q5VTR2 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC6.14□□□□□ -1.43
RNF20Q5VTR2 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.14□□□□□ -1.43
RNF20Q5VTR2 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC6.14□□□□□ -1.43
RNF20Q5VTR2 AL451044.1-201ENST00000604867 238 ntBASIC6.14□□□□□ -1.43
RNF20Q5VTR2 AC074140.1-201ENST00000621617 208 ntBASIC6.14□□□□□ -1.43
RNF20Q5VTR2 MPP6-209ENST00000625307 126 ntTSL 5 BASIC6.14□□□□□ -1.43
RNF20Q5VTR2 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC6.14□□□□□ -1.43
RNF20Q5VTR2 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
RNF20Q5VTR2 AP005432.1-201ENST00000580891 3485 ntBASIC6.14□□□□□ -1.43
RNF20Q5VTR2 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RNF20Q5VTR2 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RNF20Q5VTR2 AC083843.2-201ENST00000568248 6253 ntBASIC6.14□□□□□ -1.43
RNF20Q5VTR2 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC6.14□□□□□ -1.43
RNF20Q5VTR2 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.14□□□□□ -1.43
RNF20Q5VTR2 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
RNF20Q5VTR2 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RNF20Q5VTR2 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.13□□□□□ -1.43
RNF20Q5VTR2 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
RNF20Q5VTR2 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF20Q5VTR2 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RNF20Q5VTR2 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RNF20Q5VTR2 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RNF20Q5VTR2 RNVU1-3-201ENST00000364313 161 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms