Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 HMGB1P1-201ENST00000522557 636 ntBASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 AC013562.2-201ENST00000611632 603 ntBASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 RNU2-68P-201ENST00000410878 191 ntBASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 AC009237.2-201ENST00000421358 284 ntBASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 AC104332.2-201ENST00000429959 156 ntBASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 AC120053.1-201ENST00000607706 736 ntBASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 AC091834.1-201ENST00000614543 472 ntBASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 UBE2L2-201ENST00000254302 429 ntBASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 SNRPGP3-201ENST00000469405 227 ntBASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 SUB1P3-201ENST00000564581 315 ntBASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 AC103988.1-201ENST00000566382 2177 ntBASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 AL445685.2-201ENST00000422551 342 ntBASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 AC068781.1-201ENST00000488231 618 ntBASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 GTF2IP9-201ENST00000502460 301 ntBASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 MLLT10P2-201ENST00000506434 249 ntBASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 AC008687.2-201ENST00000597865 520 ntBASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 AC022709.1-201ENST00000615967 87 ntBASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 AC000367.1-201ENST00000452711 1766 ntBASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 HMGN2P38-201ENST00000423806 265 ntBASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 OR52A4P-203ENST00000498233 1014 ntBASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 RNA5SP490-201ENST00000517141 136 ntBASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 AC126177.3-201ENST00000551839 688 ntBASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 AP000275.1-201ENST00000411943 390 ntBASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 AC009314.1-201ENST00000603871 304 ntBASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 AL391813.2-201ENST00000609113 322 ntBASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 AC005336.3-201ENST00000623833 2679 ntBASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 AC008571.1-201ENST00000467232 300 ntBASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 MIR449C-201ENST00000516047 92 ntBASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 RNA5SP402-201ENST00000517148 110 ntBASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 OR5D17P-201ENST00000531492 978 ntBASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 AC233981.2-201ENST00000611524 1614 ntBASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 AL355578.1-201ENST00000607405 1328 ntBASIC1.23□□□□□ -2.21
VPS13DQ5THJ4 AC011978.2-201ENST00000569835 2054 ntBASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 SNORD48-201ENST00000364953 64 ntBASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 MTND1P23-201ENST00000416931 372 ntBASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 RPL7P53-201ENST00000421245 739 ntBASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 AC005517.2-201ENST00000424673 553 ntBASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 AC093392.2-201ENST00000450682 337 ntBASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 AMD1P1-201ENST00000457220 922 ntBASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 AC092991.1-201ENST00000477176 376 ntBASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 RPL7P37-201ENST00000425095 738 ntBASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 AL121594.1-201ENST00000475906 575 ntBASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 AL163540.1-201ENST00000485382 386 ntBASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 ABI1P1-201ENST00000603375 1120 ntBASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 Y_RNA.224-201ENST00000364308 111 ntBASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 NCSTNP1-201ENST00000406229 144 ntBASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 POLHP1-201ENST00000411806 470 ntBASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS13DQ5THJ4 BX248123.2-201ENST00000606318 124 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms