Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 RNF138P1-201ENST00000502765 546 ntBASIC4.77□□□□□ -1.65
CCDC178Q5BJE1 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC178Q5BJE1 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC178Q5BJE1 AL512360.1-201ENST00000555346 234 ntBASIC4.77□□□□□ -1.65
CCDC178Q5BJE1 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC178Q5BJE1 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC178Q5BJE1 AC107954.1-201ENST00000565906 727 ntBASIC4.77□□□□□ -1.65
CCDC178Q5BJE1 AL451044.1-201ENST00000604867 238 ntBASIC4.77□□□□□ -1.65
CCDC178Q5BJE1 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC178Q5BJE1 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC178Q5BJE1 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC178Q5BJE1 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC178Q5BJE1 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC178Q5BJE1 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CCDC178Q5BJE1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 AL122126.1-201ENST00000546905 1318 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 AL049555.1-201ENST00000562834 1933 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 RNU6-97P-201ENST00000363387 104 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 RNY4P14-201ENST00000363656 96 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 SNORD35B-201ENST00000363660 87 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 RNU6-1279P-201ENST00000383917 103 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 SNORA37-201ENST00000384504 129 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 PPIAP31-201ENST00000405422 495 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 AC004987.3-201ENST00000413879 771 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 AL139413.1-201ENST00000421309 217 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 MTCO1P20-201ENST00000425366 358 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 MTCO2P11-201ENST00000431069 680 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 AC127537.2-201ENST00000439258 465 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 Vault.3-201ENST00000516676 95 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 RNU6-201P-201ENST00000517100 61 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 MTND1P35-201ENST00000526739 508 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 AP000907.2-201ENST00000530827 353 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 OR8R1P-201ENST00000543943 764 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 SUB1P2-201ENST00000556401 297 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 MIR3160-1-201ENST00000577972 85 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 AL353997.4-201ENST00000586196 166 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 AC012507.3-201ENST00000603556 477 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 AC008277.2-201ENST00000605196 797 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 AC068831.8-201ENST00000620171 435 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 AC139792.3-201ENST00000623525 224 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 RLIMP1-201ENST00000339626 1680 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 AC092447.10-201ENST00000620607 1652 ntBASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC178Q5BJE1 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 AC073544.1-201ENST00000600110 1595 ntBASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 RNU5E-1-201ENST00000362477 120 ntBASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 RNU6-181P-201ENST00000363225 107 ntBASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 RNU6-1085P-201ENST00000363576 107 ntBASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 Y_RNA.234-201ENST00000364409 97 ntBASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 Y_RNA.295-201ENST00000364918 102 ntBASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 RPL23AP32-201ENST00000395315 459 ntBASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 RPL21P65-201ENST00000406094 466 ntBASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 MIR1251-201ENST00000408552 70 ntBASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 RN7SKP263-201ENST00000411194 309 ntBASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 AL353777.1-201ENST00000425552 326 ntBASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 TIMM9P3-201ENST00000428659 274 ntBASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 AC119618.1-201ENST00000434191 222 ntBASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 AL359385.1-201ENST00000456509 365 ntBASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 AP1S2P1-201ENST00000457344 379 ntBASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 NPM1P41-201ENST00000512920 831 ntBASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 RNU6-445P-201ENST00000516949 107 ntBASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 IFITM8P-201ENST00000522529 394 ntBASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC178Q5BJE1 AC090615.1-201ENST00000577519 154 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms