Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.75□□□□□ -1.97
RFX4Q33E94 AL160237.3-201ENST00000604114 1013 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.75□□□□□ -1.97
RFX4Q33E94 AC024257.5-201ENST00000612739 531 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 AC018755.4-201ENST00000619715 454 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.75□□□□□ -1.97
RFX4Q33E94 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
RFX4Q33E94 GABRG2-229ENST00000641017 3628 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.75□□□□□ -1.97
RFX4Q33E94 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
RFX4Q33E94 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.74□□□□□ -1.97
RFX4Q33E94 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.74□□□□□ -1.97
RFX4Q33E94 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RFX4Q33E94 ASNSP3-201ENST00000451989 1306 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
RFX4Q33E94 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
RFX4Q33E94 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RFX4Q33E94 RNU6-1249P-201ENST00000363237 111 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
RFX4Q33E94 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.74□□□□□ -1.97
RFX4Q33E94 SNORD116-12-201ENST00000384468 92 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 MIR7-3-201ENST00000384898 110 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
RFX4Q33E94 SNORD67-201ENST00000390833 111 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.74□□□□□ -1.97
RFX4Q33E94 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.74□□□□□ -1.97
RFX4Q33E94 Z75741.2-201ENST00000417272 1167 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 AC013410.2-201ENST00000422627 201 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.74□□□□□ -1.97
RFX4Q33E94 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.74□□□□□ -1.97
RFX4Q33E94 SAR1AP4-201ENST00000429225 591 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.74□□□□□ -1.97
RFX4Q33E94 SNRPEP4-201ENST00000435815 279 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 PRDX3P3-201ENST00000447765 522 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 RFC5P1-201ENST00000454419 874 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 RPS20P24-201ENST00000457473 361 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 snoU109.3-201ENST00000459477 145 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 AC104472.2-201ENST00000469035 601 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 RN7SL297P-201ENST00000483161 293 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 RPL9P33-201ENST00000484311 566 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.74□□□□□ -1.97
RFX4Q33E94 KLRA1P-201ENST00000503499 986 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 KLHL2P1-201ENST00000508691 521 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 SNORA31.1-201ENST00000515993 133 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 SNORA31.5-201ENST00000516190 133 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 RNU6-1225P-201ENST00000516336 65 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 SNORA9.3-201ENST00000516383 129 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.74□□□□□ -1.97
RFX4Q33E94 AC022690.1-201ENST00000526681 550 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 ELOCP31-201ENST00000540463 467 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.74□□□□□ -1.97
RFX4Q33E94 AC107016.2-201ENST00000547968 190 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RFX4Q33E94 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.74□□□□□ -1.97
RFX4Q33E94 UBL5P2-201ENST00000583788 219 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.74□□□□□ -1.97
RFX4Q33E94 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.74□□□□□ -1.97
RFX4Q33E94 AL031985.2-201ENST00000600955 480 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 ELOCP35-201ENST00000604289 336 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.74□□□□□ -1.97
RFX4Q33E94 AC002076.2-201ENST00000617362 122 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RFX4Q33E94 MIR7975-201ENST00000619350 68 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 AC006111.3-201ENST00000622137 383 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.74□□□□□ -1.97
RFX4Q33E94 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.74□□□□□ -1.97
RFX4Q33E94 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.74□□□□□ -1.97
RFX4Q33E94 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.74□□□□□ -1.97
RFX4Q33E94 AC099654.9-201ENST00000637055 678 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 LINC02211-204ENST00000642024 1070 ntBASIC2.74□□□□□ -1.97
RFX4Q33E94 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.74□□□□□ -1.97
RFX4Q33E94 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RFX4Q33E94 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RFX4Q33E94 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
RFX4Q33E94 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RFX4Q33E94 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.73□□□□□ -1.97
RFX4Q33E94 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RFX4Q33E94 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
RFX4Q33E94 SNRPEP3-201ENST00000338402 276 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 MIR592-201ENST00000384959 97 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 RNU4-22P-201ENST00000411058 166 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 AC068533.2-201ENST00000411872 306 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 AC092447.6-201ENST00000414578 210 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 USP9YP36-201ENST00000424581 829 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 AC012497.1-201ENST00000429392 575 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.73□□□□□ -1.97
RFX4Q33E94 USP9YP22-201ENST00000438971 294 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.73□□□□□ -1.97
RFX4Q33E94 PNPLA4P1-201ENST00000458328 305 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 RPS4XP10-201ENST00000465034 731 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 AC008571.1-201ENST00000467232 300 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.73□□□□□ -1.97
RFX4Q33E94 WBP1LP4-201ENST00000505043 344 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 ARL4AP2-201ENST00000507378 601 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.73□□□□□ -1.97
RFX4Q33E94 AC008837.2-201ENST00000513076 418 ntBASIC2.73□□□□□ -1.97
RFX4Q33E94 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.73□□□□□ -1.97
RFX4Q33E94 RNU6-27P-201ENST00000516146 107 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms