Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.18□□□□□ -2.06
FOXF1Q12946 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
FOXF1Q12946 AC104057.1-201ENST00000515547 497 ntBASIC2.18□□□□□ -2.06
FOXF1Q12946 AC109329.2-201ENST00000519658 482 ntBASIC2.18□□□□□ -2.06
FOXF1Q12946 AP001646.1-201ENST00000527936 915 ntBASIC2.18□□□□□ -2.06
FOXF1Q12946 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.18□□□□□ -2.06
FOXF1Q12946 AC009097.3-201ENST00000563557 1018 ntBASIC2.18□□□□□ -2.06
FOXF1Q12946 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.18□□□□□ -2.06
FOXF1Q12946 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.18□□□□□ -2.06
FOXF1Q12946 AC008687.2-201ENST00000597865 520 ntBASIC2.18□□□□□ -2.06
FOXF1Q12946 DUXAP3-201ENST00000603616 594 ntBASIC2.18□□□□□ -2.06
FOXF1Q12946 AL049779.4-201ENST00000604500 156 ntBASIC2.18□□□□□ -2.06
FOXF1Q12946 AC103810.6-201ENST00000606708 136 ntBASIC2.18□□□□□ -2.06
FOXF1Q12946 AL354696.1-201ENST00000614652 497 ntBASIC2.18□□□□□ -2.06
FOXF1Q12946 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.18□□□□□ -2.06
FOXF1Q12946 MIR1291-201ENST00000627649 87 ntBASIC2.18□□□□□ -2.06
FOXF1Q12946 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
FOXF1Q12946 AC025263.3-201ENST00000622965 1396 ntBASIC2.18□□□□□ -2.06
FOXF1Q12946 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
FOXF1Q12946 RNU1-138P-201ENST00000384093 164 ntBASIC2.17□□□□□ -2.06
FOXF1Q12946 MT-TC-201ENST00000387405 66 ntBASIC2.17□□□□□ -2.06
FOXF1Q12946 RNA5SP56-201ENST00000410277 118 ntBASIC2.17□□□□□ -2.06
FOXF1Q12946 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.17□□□□□ -2.06
FOXF1Q12946 AL158050.1-201ENST00000416077 457 ntBASIC2.17□□□□□ -2.06
FOXF1Q12946 AL357078.2-201ENST00000416486 427 ntBASIC2.17□□□□□ -2.06
FOXF1Q12946 SSXP9-201ENST00000417503 292 ntBASIC2.17□□□□□ -2.06
FOXF1Q12946 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.17□□□□□ -2.06
FOXF1Q12946 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.17□□□□□ -2.06
FOXF1Q12946 UBE2V1P5-201ENST00000440070 405 ntBASIC2.17□□□□□ -2.06
FOXF1Q12946 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.17□□□□□ -2.06
FOXF1Q12946 UBE2DNL-203ENST00000474922 222 ntBASIC2.17□□□□□ -2.06
FOXF1Q12946 RPS27P23-201ENST00000487608 251 ntBASIC2.17□□□□□ -2.06
FOXF1Q12946 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.17□□□□□ -2.06
FOXF1Q12946 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
FOXF1Q12946 AIG1P1-201ENST00000503376 148 ntBASIC2.17□□□□□ -2.06
FOXF1Q12946 SNORA31.20-201ENST00000517111 133 ntBASIC2.17□□□□□ -2.06
FOXF1Q12946 HIGD1AP6-201ENST00000521833 279 ntBASIC2.17□□□□□ -2.06
FOXF1Q12946 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.17□□□□□ -2.06
FOXF1Q12946 AC124293.1-201ENST00000530034 493 ntBASIC2.17□□□□□ -2.06
FOXF1Q12946 AC021269.2-201ENST00000532318 330 ntBASIC2.17□□□□□ -2.06
FOXF1Q12946 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.17□□□□□ -2.06
FOXF1Q12946 EIF5A2P1-201ENST00000564027 460 ntBASIC2.17□□□□□ -2.06
FOXF1Q12946 AC124283.4-201ENST00000581815 456 ntBASIC2.17□□□□□ -2.06
FOXF1Q12946 BDH2P1-201ENST00000602288 736 ntBASIC2.17□□□□□ -2.06
FOXF1Q12946 DPRXP5-201ENST00000604662 539 ntBASIC2.17□□□□□ -2.06
FOXF1Q12946 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.17□□□□□ -2.06
FOXF1Q12946 AL118556.2-201ENST00000614375 824 ntBASIC2.17□□□□□ -2.06
FOXF1Q12946 AC006249.1-201ENST00000621223 471 ntBASIC2.17□□□□□ -2.06
FOXF1Q12946 AL356118.1-201ENST00000635272 1078 ntBASIC2.17□□□□□ -2.06
FOXF1Q12946 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.17□□□□□ -2.06
FOXF1Q12946 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.17□□□□□ -2.06
FOXF1Q12946 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.16□□□□□ -2.06
FOXF1Q12946 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
FOXF1Q12946 RNU6-609P-201ENST00000365459 107 ntBASIC2.16□□□□□ -2.06
FOXF1Q12946 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
FOXF1Q12946 RNU6-1005P-201ENST00000384519 107 ntBASIC2.16□□□□□ -2.06
FOXF1Q12946 FAT1P1-201ENST00000406588 507 ntBASIC2.16□□□□□ -2.06
FOXF1Q12946 RNU6-272P-201ENST00000411028 104 ntBASIC2.16□□□□□ -2.06
FOXF1Q12946 MTCO3P12-201ENST00000416718 547 ntBASIC2.16□□□□□ -2.06
FOXF1Q12946 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.16□□□□□ -2.06
FOXF1Q12946 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.16□□□□□ -2.06
FOXF1Q12946 RPL36P19-201ENST00000430744 301 ntBASIC2.16□□□□□ -2.06
FOXF1Q12946 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC2.16□□□□□ -2.06
FOXF1Q12946 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.16□□□□□ -2.06
FOXF1Q12946 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.16□□□□□ -2.06
FOXF1Q12946 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.16□□□□□ -2.06
FOXF1Q12946 DNAJC19P8-201ENST00000452887 259 ntBASIC2.16□□□□□ -2.06
FOXF1Q12946 HMGB1P15-201ENST00000453854 435 ntBASIC2.16□□□□□ -2.06
FOXF1Q12946 AC073901.1-201ENST00000462471 408 ntBASIC2.16□□□□□ -2.06
FOXF1Q12946 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.16□□□□□ -2.06
FOXF1Q12946 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.16□□□□□ -2.06
FOXF1Q12946 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.16□□□□□ -2.06
FOXF1Q12946 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.16□□□□□ -2.06
FOXF1Q12946 AC026436.1-201ENST00000510537 270 ntBASIC2.16□□□□□ -2.06
FOXF1Q12946 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
FOXF1Q12946 SNORA31.11-201ENST00000516528 139 ntBASIC2.16□□□□□ -2.06
FOXF1Q12946 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.16□□□□□ -2.06
FOXF1Q12946 OR8K4P-201ENST00000534608 872 ntBASIC2.16□□□□□ -2.06
FOXF1Q12946 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
FOXF1Q12946 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.16□□□□□ -2.06
FOXF1Q12946 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.16□□□□□ -2.06
FOXF1Q12946 AC022069.1-201ENST00000582910 658 ntBASIC2.16□□□□□ -2.06
FOXF1Q12946 SNORD84-203ENST00000584275 78 ntBASIC2.16□□□□□ -2.06
FOXF1Q12946 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.16□□□□□ -2.06
FOXF1Q12946 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.16□□□□□ -2.06
FOXF1Q12946 AP001029.3-201ENST00000588063 596 ntBASIC2.16□□□□□ -2.06
FOXF1Q12946 AL669831.4-202ENST00000590817 238 ntBASIC2.16□□□□□ -2.06
FOXF1Q12946 BNIP3P4-201ENST00000604946 565 ntBASIC2.16□□□□□ -2.06
FOXF1Q12946 AC067747.1-201ENST00000608026 250 ntBASIC2.16□□□□□ -2.06
FOXF1Q12946 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
FOXF1Q12946 AP000676.4-201ENST00000624659 623 ntBASIC2.16□□□□□ -2.06
FOXF1Q12946 AC097372.4-201ENST00000625025 466 ntBASIC2.16□□□□□ -2.06
FOXF1Q12946 CTSLP2-204ENST00000629029 392 ntBASIC2.16□□□□□ -2.06
FOXF1Q12946 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.16□□□□□ -2.06
FOXF1Q12946 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
FOXF1Q12946 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.06
FOXF1Q12946 AC016717.2-201ENST00000609089 5141 ntBASIC2.15□□□□□ -2.06
FOXF1Q12946 RNU6-374P-201ENST00000364146 108 ntBASIC2.15□□□□□ -2.07
FOXF1Q12946 SNORD56.5-201ENST00000364281 72 ntBASIC2.15□□□□□ -2.07
FOXF1Q12946 SNORD114-30-201ENST00000364448 72 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms