Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
HMGXB3Q12766 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGXB3Q12766 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.07□□□□□ -1.92
HMGXB3Q12766 NR1H5P-201ENST00000452683 1377 ntBASIC3.07□□□□□ -1.92
HMGXB3Q12766 RPL7P37-201ENST00000425095 738 ntBASIC3.07□□□□□ -1.92
HMGXB3Q12766 FO393414.1-201ENST00000428697 1184 ntBASIC3.07□□□□□ -1.92
HMGXB3Q12766 AL451074.3-201ENST00000437709 472 ntBASIC3.07□□□□□ -1.92
HMGXB3Q12766 MTCYBP31-201ENST00000438855 1122 ntBASIC3.07□□□□□ -1.92
HMGXB3Q12766 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.07□□□□□ -1.92
HMGXB3Q12766 AL021397.1-201ENST00000451806 248 ntBASIC3.07□□□□□ -1.92
HMGXB3Q12766 PPP1R2P5-201ENST00000457256 603 ntBASIC3.07□□□□□ -1.92
HMGXB3Q12766 AC109486.1-201ENST00000486833 374 ntBASIC3.07□□□□□ -1.92
HMGXB3Q12766 AP005136.1-201ENST00000579765 429 ntBASIC3.07□□□□□ -1.92
HMGXB3Q12766 AC103810.1-201ENST00000579873 453 ntBASIC3.07□□□□□ -1.92
HMGXB3Q12766 AL356575.1-201ENST00000603008 283 ntBASIC3.07□□□□□ -1.92
HMGXB3Q12766 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.07□□□□□ -1.92
HMGXB3Q12766 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HMGXB3Q12766 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGXB3Q12766 USP9YP15-201ENST00000442391 422 ntBASIC3.06□□□□□ -1.92
HMGXB3Q12766 ARL4AP2-201ENST00000507378 601 ntBASIC3.06□□□□□ -1.92
HMGXB3Q12766 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
HMGXB3Q12766 MYL12BP1-201ENST00000569826 507 ntBASIC3.06□□□□□ -1.92
HMGXB3Q12766 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGXB3Q12766 ABI1P1-201ENST00000603375 1120 ntBASIC3.06□□□□□ -1.92
HMGXB3Q12766 AC019159.1-201ENST00000605094 187 ntBASIC3.06□□□□□ -1.92
HMGXB3Q12766 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.06□□□□□ -1.92
HMGXB3Q12766 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HMGXB3Q12766 U8.9-201ENST00000365667 134 ntBASIC3.05□□□□□ -1.92
HMGXB3Q12766 AC234782.4-201ENST00000417646 1048 ntBASIC3.05□□□□□ -1.92
HMGXB3Q12766 AC073310.1-201ENST00000423226 1033 ntBASIC3.05□□□□□ -1.92
HMGXB3Q12766 BNIP3P2-201ENST00000441221 577 ntBASIC3.05□□□□□ -1.92
HMGXB3Q12766 AC080013.2-201ENST00000460866 323 ntBASIC3.05□□□□□ -1.92
HMGXB3Q12766 RPL5P13-201ENST00000462840 709 ntBASIC3.05□□□□□ -1.92
HMGXB3Q12766 RNA5SP402-201ENST00000517148 110 ntBASIC3.05□□□□□ -1.92
HMGXB3Q12766 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.05□□□□□ -1.92
HMGXB3Q12766 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.05□□□□□ -1.92
HMGXB3Q12766 ZNF720P1-201ENST00000562403 1939 ntBASIC3.05□□□□□ -1.92
HMGXB3Q12766 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
HMGXB3Q12766 AC233981.2-201ENST00000611524 1614 ntBASIC3.04□□□□□ -1.92
HMGXB3Q12766 Y_RNA.327-201ENST00000365201 102 ntBASIC3.04□□□□□ -1.92
HMGXB3Q12766 Z98749.2-208ENST00000381646 500 ntBASIC3.04□□□□□ -1.92
HMGXB3Q12766 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC3.04□□□□□ -1.92
HMGXB3Q12766 AC007390.1-201ENST00000415722 356 ntBASIC3.04□□□□□ -1.92
HMGXB3Q12766 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.04□□□□□ -1.92
HMGXB3Q12766 RNU1-123P-201ENST00000458950 160 ntBASIC3.04□□□□□ -1.92
HMGXB3Q12766 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.04□□□□□ -1.92
HMGXB3Q12766 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.04□□□□□ -1.92
HMGXB3Q12766 AC007687.1-201ENST00000602704 304 ntBASIC3.04□□□□□ -1.92
HMGXB3Q12766 AL121917.1-203ENST00000605534 577 ntBASIC3.04□□□□□ -1.92
HMGXB3Q12766 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.04□□□□□ -1.92
HMGXB3Q12766 MTND5P7-201ENST00000413558 1798 ntBASIC3.04□□□□□ -1.92
HMGXB3Q12766 Y_RNA.191-201ENST00000363972 113 ntBASIC3.03□□□□□ -1.92
HMGXB3Q12766 HMGB1P10-201ENST00000395823 563 ntBASIC3.03□□□□□ -1.92
HMGXB3Q12766 AL590664.1-201ENST00000448065 339 ntBASIC3.03□□□□□ -1.92
HMGXB3Q12766 SSXP1-201ENST00000453640 473 ntBASIC3.03□□□□□ -1.92
HMGXB3Q12766 AC008571.1-201ENST00000467232 300 ntBASIC3.03□□□□□ -1.92
HMGXB3Q12766 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
HMGXB3Q12766 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.03□□□□□ -1.92
HMGXB3Q12766 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
HMGXB3Q12766 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
HMGXB3Q12766 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
HMGXB3Q12766 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
HMGXB3Q12766 TOMM22P1-201ENST00000418578 312 ntBASIC3.03□□□□□ -1.92
HMGXB3Q12766 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGXB3Q12766 RPL39P40-201ENST00000445481 146 ntBASIC3.03□□□□□ -1.92
HMGXB3Q12766 AC109464.2-201ENST00000510242 943 ntBASIC3.03□□□□□ -1.92
HMGXB3Q12766 HMGN1P28-201ENST00000521340 364 ntBASIC3.03□□□□□ -1.92
HMGXB3Q12766 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.03□□□□□ -1.92
HMGXB3Q12766 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGXB3Q12766 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGXB3Q12766 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
HMGXB3Q12766 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
HMGXB3Q12766 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HMGXB3Q12766 RNU6-356P-201ENST00000384140 107 ntBASIC3.02□□□□□ -1.93
HMGXB3Q12766 MIR1323-201ENST00000408090 73 ntBASIC3.02□□□□□ -1.93
HMGXB3Q12766 USP9YP10-201ENST00000454868 628 ntBASIC3.02□□□□□ -1.93
HMGXB3Q12766 RNU6-717P-201ENST00000459076 104 ntBASIC3.02□□□□□ -1.93
HMGXB3Q12766 AC090453.1-201ENST00000495560 436 ntBASIC3.02□□□□□ -1.93
HMGXB3Q12766 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HMGXB3Q12766 AC087441.2-201ENST00000529141 262 ntBASIC3.02□□□□□ -1.93
HMGXB3Q12766 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGXB3Q12766 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGXB3Q12766 RNU6-178P-201ENST00000384631 104 ntBASIC3.01□□□□□ -1.93
HMGXB3Q12766 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.01□□□□□ -1.93
HMGXB3Q12766 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGXB3Q12766 NEK4P1-201ENST00000433383 879 ntBASIC3.01□□□□□ -1.93
HMGXB3Q12766 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGXB3Q12766 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HMGXB3Q12766 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGXB3Q12766 MAGOH2P-202ENST00000584384 429 ntBASIC3.01□□□□□ -1.93
HMGXB3Q12766 AC024560.3-201ENST00000608482 349 ntBASIC3.01□□□□□ -1.93
HMGXB3Q12766 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HMGXB3Q12766 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.01□□□□□ -1.93
HMGXB3Q12766 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
HMGXB3Q12766 RNU4-13P-201ENST00000364019 141 ntBASIC3□□□□□ -1.93
HMGXB3Q12766 Y_RNA.374-201ENST00000365606 101 ntBASIC3□□□□□ -1.93
HMGXB3Q12766 FNDC3CP-201ENST00000420795 1155 ntBASIC3□□□□□ -1.93
HMGXB3Q12766 ARPC3P1-201ENST00000437218 533 ntBASIC3□□□□□ -1.93
HMGXB3Q12766 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3□□□□□ -1.93
HMGXB3Q12766 RPL12P25-201ENST00000455592 494 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms