Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LTBQ06643 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LTBQ06643 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.72□□□□□ -1.81
LTBQ06643 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
LTBQ06643 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LTBQ06643 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.71□□□□□ -1.81
LTBQ06643 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
LTBQ06643 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.71□□□□□ -1.81
LTBQ06643 OR11H5P-202ENST00000641612 1325 ntBASIC3.71□□□□□ -1.81
LTBQ06643 FARSBP1-201ENST00000435808 1778 ntBASIC3.71□□□□□ -1.81
LTBQ06643 AC116667.1-201ENST00000604855 2072 ntBASIC3.71□□□□□ -1.82
LTBQ06643 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LTBQ06643 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.71□□□□□ -1.82
LTBQ06643 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
LTBQ06643 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
LTBQ06643 OR52B1P-201ENST00000316506 909 ntBASIC3.71□□□□□ -1.82
LTBQ06643 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
LTBQ06643 DSTNP4-201ENST00000399472 474 ntBASIC3.71□□□□□ -1.82
LTBQ06643 TPMTP2-201ENST00000414372 726 ntBASIC3.71□□□□□ -1.82
LTBQ06643 AL138785.1-201ENST00000425821 331 ntBASIC3.71□□□□□ -1.82
LTBQ06643 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.71□□□□□ -1.82
LTBQ06643 ELOCP14-201ENST00000428070 331 ntBASIC3.71□□□□□ -1.82
LTBQ06643 AL445584.1-201ENST00000431451 330 ntBASIC3.71□□□□□ -1.82
LTBQ06643 MTND3P23-201ENST00000431980 347 ntBASIC3.71□□□□□ -1.82
LTBQ06643 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.71□□□□□ -1.82
LTBQ06643 SKP1P1-201ENST00000438081 489 ntBASIC3.71□□□□□ -1.82
LTBQ06643 ELOCP7-201ENST00000439968 331 ntBASIC3.71□□□□□ -1.82
LTBQ06643 MTCO3P18-201ENST00000440206 761 ntBASIC3.71□□□□□ -1.82
LTBQ06643 AC079448.1-201ENST00000449377 373 ntBASIC3.71□□□□□ -1.82
LTBQ06643 FABP3P2-201ENST00000453169 399 ntBASIC3.71□□□□□ -1.82
LTBQ06643 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.71□□□□□ -1.82
LTBQ06643 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.71□□□□□ -1.82
LTBQ06643 MTCO3P20-201ENST00000454926 688 ntBASIC3.71□□□□□ -1.82
LTBQ06643 MTCO3P2-201ENST00000457365 171 ntBASIC3.71□□□□□ -1.82
LTBQ06643 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.71□□□□□ -1.82
LTBQ06643 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.71□□□□□ -1.82
LTBQ06643 MTND1P3-201ENST00000484956 952 ntBASIC3.71□□□□□ -1.82
LTBQ06643 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.71□□□□□ -1.82
LTBQ06643 AC112204.1-201ENST00000502591 103 ntBASIC3.71□□□□□ -1.82
LTBQ06643 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.71□□□□□ -1.82
LTBQ06643 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.71□□□□□ -1.82
LTBQ06643 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LTBQ06643 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LTBQ06643 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.71□□□□□ -1.82
LTBQ06643 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.71□□□□□ -1.82
LTBQ06643 Y_RNA.702-201ENST00000516843 96 ntBASIC3.71□□□□□ -1.82
LTBQ06643 IGKV2-38-201ENST00000517443 247 ntBASIC3.71□□□□□ -1.82
LTBQ06643 OR4R3P-201ENST00000525084 838 ntBASIC3.71□□□□□ -1.82
LTBQ06643 AP001646.1-201ENST00000527936 915 ntBASIC3.71□□□□□ -1.82
LTBQ06643 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
LTBQ06643 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.71□□□□□ -1.82
LTBQ06643 HSPE1P3-201ENST00000559254 309 ntBASIC3.71□□□□□ -1.82
LTBQ06643 AL157394.1-201ENST00000562983 1224 ntBASIC3.71□□□□□ -1.82
LTBQ06643 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.71□□□□□ -1.82
LTBQ06643 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.71□□□□□ -1.82
LTBQ06643 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.71□□□□□ -1.82
LTBQ06643 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.71□□□□□ -1.82
LTBQ06643 AC068790.5-201ENST00000602741 355 ntBASIC3.71□□□□□ -1.82
LTBQ06643 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.71□□□□□ -1.82
LTBQ06643 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.71□□□□□ -1.82
LTBQ06643 RMST_9.1-201ENST00000619945 193 ntBASIC3.71□□□□□ -1.82
LTBQ06643 AP006248.2-201ENST00000623309 592 ntBASIC3.71□□□□□ -1.82
LTBQ06643 AC012442.3-202ENST00000636742 206 ntBASIC3.71□□□□□ -1.82
LTBQ06643 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
LTBQ06643 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LTBQ06643 AC107081.3-201ENST00000612715 2034 ntBASIC3.71□□□□□ -1.82
LTBQ06643 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.71□□□□□ -1.82
LTBQ06643 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LTBQ06643 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.71□□□□□ -1.82
LTBQ06643 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LTBQ06643 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LTBQ06643 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LTBQ06643 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LTBQ06643 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LTBQ06643 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.7□□□□□ -1.82
LTBQ06643 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.7□□□□□ -1.82
LTBQ06643 RNU6-343P-201ENST00000364709 104 ntBASIC3.7□□□□□ -1.82
LTBQ06643 Y_RNA.402-201ENST00000383972 102 ntBASIC3.7□□□□□ -1.82
LTBQ06643 Y_RNA.409-201ENST00000383990 98 ntBASIC3.7□□□□□ -1.82
LTBQ06643 RNU6-114P-201ENST00000384704 105 ntBASIC3.7□□□□□ -1.82
LTBQ06643 SNORD115.1-201ENST00000391109 76 ntBASIC3.7□□□□□ -1.82
LTBQ06643 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.7□□□□□ -1.82
LTBQ06643 EIF5P1-201ENST00000400019 1231 ntBASIC3.7□□□□□ -1.82
LTBQ06643 RPS20P2-201ENST00000402520 389 ntBASIC3.7□□□□□ -1.82
LTBQ06643 RNU4-55P-201ENST00000410731 137 ntBASIC3.7□□□□□ -1.82
LTBQ06643 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LTBQ06643 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.7□□□□□ -1.82
LTBQ06643 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LTBQ06643 MTND4P28-201ENST00000426217 387 ntBASIC3.7□□□□□ -1.82
LTBQ06643 AL589872.1-201ENST00000426602 288 ntBASIC3.7□□□□□ -1.82
LTBQ06643 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.7□□□□□ -1.82
LTBQ06643 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.7□□□□□ -1.82
LTBQ06643 ISCA1P6-201ENST00000427740 390 ntBASIC3.7□□□□□ -1.82
LTBQ06643 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.7□□□□□ -1.82
LTBQ06643 RPL23AP46-201ENST00000438548 490 ntBASIC3.7□□□□□ -1.82
LTBQ06643 DPPA3P1-201ENST00000448050 469 ntBASIC3.7□□□□□ -1.82
LTBQ06643 HMGB3P22-202ENST00000451823 572 ntBASIC3.7□□□□□ -1.82
LTBQ06643 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.7□□□□□ -1.82
LTBQ06643 BX322784.1-201ENST00000455793 1077 ntBASIC3.7□□□□□ -1.82
LTBQ06643 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms