Protein–RNA interactions for Protein: Q05209

PTPN12, Tyrosine-protein phosphatase non-receptor type 12, humanhuman

Known RBP Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12Q05209 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN12Q05209 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
PTPN12Q05209 AL136164.3-201ENST00000624429 3978 ntBASIC5.68□□□□□ -1.5
PTPN12Q05209 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
PTPN12Q05209 AC104118.1-201ENST00000607625 1589 ntBASIC5.67□□□□□ -1.5
PTPN12Q05209 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN12Q05209 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN12Q05209 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PTPN12Q05209 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PTPN12Q05209 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN12Q05209 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN12Q05209 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.67□□□□□ -1.5
PTPN12Q05209 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PTPN12Q05209 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN12Q05209 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN12Q05209 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN12Q05209 RNU1-83P-201ENST00000363426 164 ntBASIC5.67□□□□□ -1.5
PTPN12Q05209 SNORA63C-201ENST00000364578 129 ntBASIC5.67□□□□□ -1.5
PTPN12Q05209 SNORA71.2-201ENST00000364941 134 ntBASIC5.67□□□□□ -1.5
PTPN12Q05209 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN12Q05209 RNU6-474P-201ENST00000384243 107 ntBASIC5.67□□□□□ -1.5
PTPN12Q05209 MIR134-201ENST00000385258 73 ntBASIC5.67□□□□□ -1.5
PTPN12Q05209 Z98745.1-201ENST00000402553 494 ntBASIC5.67□□□□□ -1.5
PTPN12Q05209 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.67□□□□□ -1.5
PTPN12Q05209 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN12Q05209 RPL7AP25-201ENST00000423357 805 ntBASIC5.67□□□□□ -1.5
PTPN12Q05209 RPS12P5-201ENST00000423449 371 ntBASIC5.67□□□□□ -1.5
PTPN12Q05209 RPS27AP12-201ENST00000429552 465 ntBASIC5.67□□□□□ -1.5
PTPN12Q05209 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.67□□□□□ -1.5
PTPN12Q05209 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN12Q05209 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN12Q05209 FGF7P3-201ENST00000454645 303 ntBASIC5.67□□□□□ -1.5
PTPN12Q05209 AC108059.3-201ENST00000456388 214 ntBASIC5.67□□□□□ -1.5
PTPN12Q05209 Y_RNA.631-201ENST00000459607 101 ntBASIC5.67□□□□□ -1.5
PTPN12Q05209 AC083904.1-201ENST00000487828 231 ntBASIC5.67□□□□□ -1.5
PTPN12Q05209 AL139099.1-201ENST00000497398 403 ntBASIC5.67□□□□□ -1.5
PTPN12Q05209 AC020893.1-201ENST00000502452 580 ntBASIC5.67□□□□□ -1.5
PTPN12Q05209 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN12Q05209 SNORD27.1-201ENST00000516319 72 ntBASIC5.67□□□□□ -1.5
PTPN12Q05209 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN12Q05209 AP000827.1-201ENST00000527814 258 ntBASIC5.67□□□□□ -1.5
PTPN12Q05209 AC103843.2-201ENST00000530523 682 ntBASIC5.67□□□□□ -1.5
PTPN12Q05209 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN12Q05209 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN12Q05209 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN12Q05209 MIR3138-201ENST00000585238 82 ntBASIC5.67□□□□□ -1.5
PTPN12Q05209 AL451044.1-201ENST00000604867 238 ntBASIC5.67□□□□□ -1.5
PTPN12Q05209 AL022345.1-201ENST00000607292 135 ntBASIC5.67□□□□□ -1.5
PTPN12Q05209 AC245517.5-201ENST00000611529 162 ntBASIC5.67□□□□□ -1.5
PTPN12Q05209 AC040168.1-201ENST00000623594 991 ntBASIC5.67□□□□□ -1.5
PTPN12Q05209 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN12Q05209 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN12Q05209 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PTPN12Q05209 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN12Q05209 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN12Q05209 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN12Q05209 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN12Q05209 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN12Q05209 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN12Q05209 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PTPN12Q05209 SAGE4P-201ENST00000442271 3381 ntBASIC5.66□□□□□ -1.5
PTPN12Q05209 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN12Q05209 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN12Q05209 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN12Q05209 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.66□□□□□ -1.5
PTPN12Q05209 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
PTPN12Q05209 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN12Q05209 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
PTPN12Q05209 RNU6-1160P-201ENST00000384546 104 ntBASIC5.66□□□□□ -1.5
PTPN12Q05209 MIR454-201ENST00000390180 115 ntBASIC5.66□□□□□ -1.5
PTPN12Q05209 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN12Q05209 RN7SKP247-201ENST00000411094 308 ntBASIC5.66□□□□□ -1.5
PTPN12Q05209 VN1R36P-201ENST00000414936 291 ntBASIC5.66□□□□□ -1.5
PTPN12Q05209 RPL23AP93-201ENST00000440847 484 ntBASIC5.66□□□□□ -1.5
PTPN12Q05209 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.66□□□□□ -1.5
PTPN12Q05209 RAC1P7-201ENST00000445367 377 ntBASIC5.66□□□□□ -1.5
PTPN12Q05209 AC104308.1-201ENST00000454621 333 ntBASIC5.66□□□□□ -1.5
PTPN12Q05209 RNU7-182P-201ENST00000459009 62 ntBASIC5.66□□□□□ -1.5
PTPN12Q05209 AC090096.1-201ENST00000489168 390 ntBASIC5.66□□□□□ -1.5
PTPN12Q05209 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.66□□□□□ -1.5
PTPN12Q05209 FTH1P21-201ENST00000512179 511 ntBASIC5.66□□□□□ -1.5
PTPN12Q05209 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.66□□□□□ -1.5
PTPN12Q05209 Y_RNA.665-201ENST00000516177 98 ntBASIC5.66□□□□□ -1.5
PTPN12Q05209 RNU6-273P-201ENST00000516937 96 ntBASIC5.66□□□□□ -1.5
PTPN12Q05209 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.66□□□□□ -1.5
PTPN12Q05209 LSM3P2-201ENST00000551246 273 ntBASIC5.66□□□□□ -1.5
PTPN12Q05209 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.66□□□□□ -1.5
PTPN12Q05209 VN1R85P-201ENST00000601587 426 ntBASIC5.66□□□□□ -1.5
PTPN12Q05209 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.66□□□□□ -1.5
PTPN12Q05209 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.66□□□□□ -1.5
PTPN12Q05209 AC244517.1-201ENST00000606030 2086 ntBASIC5.66□□□□□ -1.5
PTPN12Q05209 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
PTPN12Q05209 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PTPN12Q05209 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PTPN12Q05209 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PTPN12Q05209 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PTPN12Q05209 AC009951.1-201ENST00000623674 2614 ntBASIC5.65□□□□□ -1.5
PTPN12Q05209 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PTPN12Q05209 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTPN12Q05209 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms