Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
RAE1P78406 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
RAE1P78406 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
RAE1P78406 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RAE1P78406 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
RAE1P78406 RNU6-1085P-201ENST00000363576 107 ntBASIC3.9□□□□□ -1.79
RAE1P78406 RNU1-32P-201ENST00000363937 159 ntBASIC3.9□□□□□ -1.79
RAE1P78406 RNY1P12-201ENST00000364251 105 ntBASIC3.9□□□□□ -1.79
RAE1P78406 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RAE1P78406 RNU6-1279P-201ENST00000383917 103 ntBASIC3.9□□□□□ -1.79
RAE1P78406 HSPD1P16-201ENST00000402302 394 ntBASIC3.9□□□□□ -1.79
RAE1P78406 RNU4-25P-201ENST00000410569 230 ntBASIC3.9□□□□□ -1.79
RAE1P78406 RNU4-78P-201ENST00000410940 126 ntBASIC3.9□□□□□ -1.79
RAE1P78406 RPL37P18-201ENST00000411602 243 ntBASIC3.9□□□□□ -1.79
RAE1P78406 HMGN1P24-201ENST00000412282 298 ntBASIC3.9□□□□□ -1.79
RAE1P78406 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.9□□□□□ -1.79
RAE1P78406 AC009480.2-201ENST00000422916 432 ntBASIC3.9□□□□□ -1.79
RAE1P78406 AC007283.2-201ENST00000424739 197 ntBASIC3.9□□□□□ -1.79
RAE1P78406 RWDD4P2-201ENST00000426392 563 ntBASIC3.9□□□□□ -1.79
RAE1P78406 DNAJC19P7-201ENST00000428811 344 ntBASIC3.9□□□□□ -1.79
RAE1P78406 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.9□□□□□ -1.79
RAE1P78406 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.9□□□□□ -1.79
RAE1P78406 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.9□□□□□ -1.79
RAE1P78406 RNU7-59P-201ENST00000459101 61 ntBASIC3.9□□□□□ -1.79
RAE1P78406 RPL31P58-201ENST00000469001 379 ntBASIC3.9□□□□□ -1.79
RAE1P78406 AC079382.1-201ENST00000493346 557 ntBASIC3.9□□□□□ -1.79
RAE1P78406 AC139783.2-201ENST00000504847 1145 ntBASIC3.9□□□□□ -1.79
RAE1P78406 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.9□□□□□ -1.79
RAE1P78406 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RAE1P78406 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.9□□□□□ -1.79
RAE1P78406 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.9□□□□□ -1.79
RAE1P78406 RNU6-798P-201ENST00000516912 103 ntBASIC3.9□□□□□ -1.79
RAE1P78406 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.9□□□□□ -1.79
RAE1P78406 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RAE1P78406 AK6P1-201ENST00000540219 478 ntBASIC3.9□□□□□ -1.79
RAE1P78406 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.9□□□□□ -1.79
RAE1P78406 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.9□□□□□ -1.79
RAE1P78406 AC012417.1-201ENST00000582307 1039 ntBASIC3.9□□□□□ -1.79
RAE1P78406 MIR3138-201ENST00000585238 82 ntBASIC3.9□□□□□ -1.79
RAE1P78406 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.9□□□□□ -1.79
RAE1P78406 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.9□□□□□ -1.79
RAE1P78406 AC012507.3-201ENST00000603556 477 ntBASIC3.9□□□□□ -1.79
RAE1P78406 AC104662.1-201ENST00000604448 511 ntBASIC3.9□□□□□ -1.79
RAE1P78406 IGHV3-29-201ENST00000604817 344 ntBASIC3.9□□□□□ -1.79
RAE1P78406 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.9□□□□□ -1.79
RAE1P78406 AC245517.5-201ENST00000611529 162 ntBASIC3.9□□□□□ -1.79
RAE1P78406 MIR3653-201ENST00000625572 110 ntBASIC3.9□□□□□ -1.79
RAE1P78406 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.9□□□□□ -1.79
RAE1P78406 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.9□□□□□ -1.79
RAE1P78406 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
RAE1P78406 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.9□□□□□ -1.79
RAE1P78406 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.9□□□□□ -1.79
RAE1P78406 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RAE1P78406 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RAE1P78406 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RAE1P78406 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.89□□□□□ -1.79
RAE1P78406 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
RAE1P78406 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.89□□□□□ -1.79
RAE1P78406 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RAE1P78406 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
RAE1P78406 Y_RNA.159-201ENST00000363674 87 ntBASIC3.89□□□□□ -1.79
RAE1P78406 RNU6-169P-201ENST00000365336 107 ntBASIC3.89□□□□□ -1.79
RAE1P78406 RNU6-108P-201ENST00000365558 107 ntBASIC3.89□□□□□ -1.79
RAE1P78406 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
RAE1P78406 RNU11-4P-201ENST00000391149 133 ntBASIC3.89□□□□□ -1.79
RAE1P78406 AL121834.1-202ENST00000404494 277 ntBASIC3.89□□□□□ -1.79
RAE1P78406 RNU2-62P-201ENST00000410868 191 ntBASIC3.89□□□□□ -1.79
RAE1P78406 RNA5SP39-201ENST00000411245 120 ntBASIC3.89□□□□□ -1.79
RAE1P78406 FAR2P2-201ENST00000413041 594 ntBASIC3.89□□□□□ -1.79
RAE1P78406 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.89□□□□□ -1.79
RAE1P78406 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
RAE1P78406 HMGB3P20-201ENST00000417997 600 ntBASIC3.89□□□□□ -1.79
RAE1P78406 AC004552.1-201ENST00000419089 348 ntBASIC3.89□□□□□ -1.79
RAE1P78406 RPS12P23-201ENST00000419579 400 ntBASIC3.89□□□□□ -1.79
RAE1P78406 OR1AA1P-201ENST00000419597 916 ntBASIC3.89□□□□□ -1.79
RAE1P78406 AL137014.1-201ENST00000420490 1226 ntBASIC3.89□□□□□ -1.79
RAE1P78406 AC016712.1-201ENST00000431088 378 ntBASIC3.89□□□□□ -1.79
RAE1P78406 AC011742.1-201ENST00000431448 434 ntBASIC3.89□□□□□ -1.79
RAE1P78406 AC069285.2-201ENST00000440210 275 ntBASIC3.89□□□□□ -1.79
RAE1P78406 AL353572.1-201ENST00000442490 417 ntBASIC3.89□□□□□ -1.79
RAE1P78406 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.89□□□□□ -1.79
RAE1P78406 NANOGP10-201ENST00000453325 895 ntBASIC3.89□□□□□ -1.79
RAE1P78406 RPS26P3-201ENST00000470205 348 ntBASIC3.89□□□□□ -1.79
RAE1P78406 AC090543.2-201ENST00000483963 348 ntBASIC3.89□□□□□ -1.79
RAE1P78406 AC004057.1-201ENST00000485827 348 ntBASIC3.89□□□□□ -1.79
RAE1P78406 FAM92A1P2-202ENST00000504766 877 ntBASIC3.89□□□□□ -1.79
RAE1P78406 PRDX4P1-201ENST00000507189 574 ntBASIC3.89□□□□□ -1.79
RAE1P78406 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.89□□□□□ -1.79
RAE1P78406 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.89□□□□□ -1.79
RAE1P78406 AC093840.1-201ENST00000511599 336 ntBASIC3.89□□□□□ -1.79
RAE1P78406 Y_RNA.693-201ENST00000516641 110 ntBASIC3.89□□□□□ -1.79
RAE1P78406 CDH12P4-201ENST00000517835 295 ntBASIC3.89□□□□□ -1.79
RAE1P78406 CDH12P3-201ENST00000517935 295 ntBASIC3.89□□□□□ -1.79
RAE1P78406 CDH12P1-201ENST00000518435 295 ntBASIC3.89□□□□□ -1.79
RAE1P78406 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.89□□□□□ -1.79
RAE1P78406 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.89□□□□□ -1.79
RAE1P78406 AC109635.3-201ENST00000529536 185 ntBASIC3.89□□□□□ -1.79
RAE1P78406 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.89□□□□□ -1.79
RAE1P78406 AP000857.1-201ENST00000532151 543 ntBASIC3.89□□□□□ -1.79
RAE1P78406 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms