Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 SAR1AP4-201ENST00000429225 591 ntBASIC3.19□□□□□ -1.9
CCNA1P78396 EZH2P1-201ENST00000431167 291 ntBASIC3.19□□□□□ -1.9
CCNA1P78396 RPL23AP22-201ENST00000437556 453 ntBASIC3.19□□□□□ -1.9
CCNA1P78396 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.19□□□□□ -1.9
CCNA1P78396 RPL7P55-201ENST00000450522 746 ntBASIC3.19□□□□□ -1.9
CCNA1P78396 AL031183.1-201ENST00000457667 207 ntBASIC3.19□□□□□ -1.9
CCNA1P78396 RPL32P14-201ENST00000463196 378 ntBASIC3.19□□□□□ -1.9
CCNA1P78396 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.19□□□□□ -1.9
CCNA1P78396 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.19□□□□□ -1.9
CCNA1P78396 AC006390.1-201ENST00000508068 283 ntBASIC3.19□□□□□ -1.9
CCNA1P78396 AC096725.1-201ENST00000514266 313 ntBASIC3.19□□□□□ -1.9
CCNA1P78396 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.19□□□□□ -1.9
CCNA1P78396 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCNA1P78396 HPRT1P3-201ENST00000539521 576 ntBASIC3.19□□□□□ -1.9
CCNA1P78396 AC091544.4-201ENST00000555268 342 ntBASIC3.19□□□□□ -1.9
CCNA1P78396 NIFKP8-201ENST00000560500 874 ntBASIC3.19□□□□□ -1.9
CCNA1P78396 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCNA1P78396 GLUD1P4-201ENST00000590914 418 ntBASIC3.19□□□□□ -1.9
CCNA1P78396 AC012669.1-201ENST00000603209 283 ntBASIC3.19□□□□□ -1.9
CCNA1P78396 AP002826.1-201ENST00000608835 315 ntBASIC3.19□□□□□ -1.9
CCNA1P78396 AC003001.2-201ENST00000616294 831 ntBASIC3.19□□□□□ -1.9
CCNA1P78396 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.19□□□□□ -1.9
CCNA1P78396 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.19□□□□□ -1.9
CCNA1P78396 MFSD8-245ENST00000641743 948 ntBASIC3.19□□□□□ -1.9
CCNA1P78396 MTND5P7-201ENST00000413558 1798 ntBASIC3.19□□□□□ -1.9
CCNA1P78396 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CCNA1P78396 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCNA1P78396 U3.6-201ENST00000363622 211 ntBASIC3.18□□□□□ -1.9
CCNA1P78396 RSL24D1P4-201ENST00000400938 484 ntBASIC3.18□□□□□ -1.9
CCNA1P78396 AL136372.1-201ENST00000403060 228 ntBASIC3.18□□□□□ -1.9
CCNA1P78396 RPL23AP58-201ENST00000440453 469 ntBASIC3.18□□□□□ -1.9
CCNA1P78396 AL121871.1-201ENST00000443413 436 ntBASIC3.18□□□□□ -1.9
CCNA1P78396 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.18□□□□□ -1.9
CCNA1P78396 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.18□□□□□ -1.9
CCNA1P78396 CDC42P1-201ENST00000456658 548 ntBASIC3.18□□□□□ -1.9
CCNA1P78396 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.18□□□□□ -1.9
CCNA1P78396 AC093278.1-201ENST00000494700 600 ntBASIC3.18□□□□□ -1.9
CCNA1P78396 AC011352.3-201ENST00000505162 593 ntBASIC3.18□□□□□ -1.9
CCNA1P78396 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.18□□□□□ -1.9
CCNA1P78396 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.18□□□□□ -1.9
CCNA1P78396 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.18□□□□□ -1.9
CCNA1P78396 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.18□□□□□ -1.9
CCNA1P78396 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CCNA1P78396 AP000916.1-201ENST00000533869 835 ntBASIC3.18□□□□□ -1.9
CCNA1P78396 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.18□□□□□ -1.9
CCNA1P78396 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.18□□□□□ -1.9
CCNA1P78396 NUTF2P8-201ENST00000604593 363 ntBASIC3.18□□□□□ -1.9
CCNA1P78396 MIR6715A-201ENST00000615929 79 ntBASIC3.18□□□□□ -1.9
CCNA1P78396 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.18□□□□□ -1.9
CCNA1P78396 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.18□□□□□ -1.9
CCNA1P78396 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CCNA1P78396 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CCNA1P78396 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CCNA1P78396 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.17□□□□□ -1.9
CCNA1P78396 U3.12-201ENST00000364498 214 ntBASIC3.17□□□□□ -1.9
CCNA1P78396 MIR512-1-201ENST00000384913 84 ntBASIC3.17□□□□□ -1.9
CCNA1P78396 MIR493-201ENST00000385254 89 ntBASIC3.17□□□□□ -1.9
CCNA1P78396 RPL7P10-201ENST00000417407 739 ntBASIC3.17□□□□□ -1.9
CCNA1P78396 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.17□□□□□ -1.9
CCNA1P78396 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.17□□□□□ -1.9
CCNA1P78396 SETP8-201ENST00000435341 628 ntBASIC3.17□□□□□ -1.9
CCNA1P78396 AC092798.1-201ENST00000458542 409 ntBASIC3.17□□□□□ -1.9
CCNA1P78396 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
CCNA1P78396 SETP11-201ENST00000473027 690 ntBASIC3.17□□□□□ -1.9
CCNA1P78396 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCNA1P78396 TRBV12-1-201ENST00000479785 344 ntBASIC3.17□□□□□ -1.9
CCNA1P78396 OR52A4P-202ENST00000481634 799 ntBASIC3.17□□□□□ -1.9
CCNA1P78396 AC118282.2-201ENST00000508739 374 ntBASIC3.17□□□□□ -1.9
CCNA1P78396 AC048346.1-201ENST00000510247 144 ntBASIC3.17□□□□□ -1.9
CCNA1P78396 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.17□□□□□ -1.9
CCNA1P78396 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.17□□□□□ -1.9
CCNA1P78396 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.17□□□□□ -1.9
CCNA1P78396 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.17□□□□□ -1.9
CCNA1P78396 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
CCNA1P78396 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.17□□□□□ -1.9
CCNA1P78396 AC234778.2-201ENST00000566241 354 ntBASIC3.17□□□□□ -1.9
CCNA1P78396 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.17□□□□□ -1.9
CCNA1P78396 AC078899.3-201ENST00000599065 212 ntBASIC3.17□□□□□ -1.9
CCNA1P78396 VN1R9P-201ENST00000614184 867 ntBASIC3.17□□□□□ -1.9
CCNA1P78396 MIR6817-201ENST00000615588 66 ntBASIC3.17□□□□□ -1.9
CCNA1P78396 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.17□□□□□ -1.9
CCNA1P78396 AL353748.2-201ENST00000622148 471 ntBASIC3.17□□□□□ -1.9
CCNA1P78396 AL512506.2-201ENST00000624472 458 ntBASIC3.17□□□□□ -1.9
CCNA1P78396 AC243829.7-201ENST00000633081 225 ntBASIC3.17□□□□□ -1.9
CCNA1P78396 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCNA1P78396 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCNA1P78396 AC087359.1-201ENST00000508335 1740 ntBASIC3.16□□□□□ -1.9
CCNA1P78396 ELF2P3-201ENST00000445099 1506 ntBASIC3.16□□□□□ -1.9
CCNA1P78396 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCNA1P78396 RNA5SP68-201ENST00000363885 119 ntBASIC3.16□□□□□ -1.9
CCNA1P78396 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCNA1P78396 SNORD51-201ENST00000384320 80 ntBASIC3.16□□□□□ -1.9
CCNA1P78396 SNORA46-201ENST00000384762 135 ntBASIC3.16□□□□□ -1.9
CCNA1P78396 SNORD65C-201ENST00000390962 71 ntBASIC3.16□□□□□ -1.9
CCNA1P78396 AP002784.2-201ENST00000397300 549 ntBASIC3.16□□□□□ -1.9
CCNA1P78396 AL139095.1-201ENST00000404326 391 ntBASIC3.16□□□□□ -1.9
CCNA1P78396 AL139098.1-201ENST00000407291 389 ntBASIC3.16□□□□□ -1.9
CCNA1P78396 AC092447.6-201ENST00000414578 210 ntBASIC3.16□□□□□ -1.9
CCNA1P78396 MTCO3P43-201ENST00000440974 771 ntBASIC3.16□□□□□ -1.9
CCNA1P78396 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms