Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SRP54P61011 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.28□□□□□ -1.88
SRP54P61011 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.27□□□□□ -1.89
SRP54P61011 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SRP54P61011 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.27□□□□□ -1.89
SRP54P61011 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SRP54P61011 AL031679.1-201ENST00000400616 525 ntBASIC3.27□□□□□ -1.89
SRP54P61011 SKINT1L-201ENST00000401057 817 ntBASIC3.27□□□□□ -1.89
SRP54P61011 AL136116.1-201ENST00000403591 381 ntBASIC3.27□□□□□ -1.89
SRP54P61011 AL357075.1-201ENST00000404107 726 ntBASIC3.27□□□□□ -1.89
SRP54P61011 AC126124.2-201ENST00000413542 321 ntBASIC3.27□□□□□ -1.89
SRP54P61011 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SRP54P61011 TPMTP2-201ENST00000414372 726 ntBASIC3.27□□□□□ -1.89
SRP54P61011 SNRPEP4-201ENST00000435815 279 ntBASIC3.27□□□□□ -1.89
SRP54P61011 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.27□□□□□ -1.89
SRP54P61011 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.27□□□□□ -1.89
SRP54P61011 Z75741.1-201ENST00000446793 314 ntBASIC3.27□□□□□ -1.89
SRP54P61011 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.27□□□□□ -1.89
SRP54P61011 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.27□□□□□ -1.89
SRP54P61011 AC097493.1-201ENST00000463958 372 ntBASIC3.27□□□□□ -1.89
SRP54P61011 RN7SL504P-201ENST00000494496 287 ntBASIC3.27□□□□□ -1.89
SRP54P61011 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.27□□□□□ -1.89
SRP54P61011 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.27□□□□□ -1.89
SRP54P61011 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.27□□□□□ -1.89
SRP54P61011 AC068657.1-201ENST00000520807 306 ntBASIC3.27□□□□□ -1.89
SRP54P61011 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.27□□□□□ -1.89
SRP54P61011 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SRP54P61011 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.27□□□□□ -1.89
SRP54P61011 AL163153.1-201ENST00000554223 283 ntBASIC3.27□□□□□ -1.89
SRP54P61011 AC005476.1-201ENST00000554427 397 ntBASIC3.27□□□□□ -1.89
SRP54P61011 AC090615.1-201ENST00000577519 154 ntBASIC3.27□□□□□ -1.89
SRP54P61011 AC015917.1-201ENST00000579654 510 ntBASIC3.27□□□□□ -1.89
SRP54P61011 MIR4506-201ENST00000584693 77 ntBASIC3.27□□□□□ -1.89
SRP54P61011 AP001269.3-201ENST00000588718 329 ntBASIC3.27□□□□□ -1.89
SRP54P61011 AC012493.2-201ENST00000595083 291 ntBASIC3.27□□□□□ -1.89
SRP54P61011 AL160281.1-201ENST00000605307 311 ntBASIC3.27□□□□□ -1.89
SRP54P61011 AC073657.2-201ENST00000605661 303 ntBASIC3.27□□□□□ -1.89
SRP54P61011 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SRP54P61011 AL451074.6-201ENST00000608512 729 ntBASIC3.27□□□□□ -1.89
SRP54P61011 AC068831.7-201ENST00000616954 363 ntBASIC3.27□□□□□ -1.89
SRP54P61011 AL357080.1-201ENST00000617394 239 ntBASIC3.27□□□□□ -1.89
SRP54P61011 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.27□□□□□ -1.89
SRP54P61011 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
SRP54P61011 AC099786.3-201ENST00000565735 1410 ntBASIC3.27□□□□□ -1.89
SRP54P61011 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
SRP54P61011 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SRP54P61011 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.26□□□□□ -1.89
SRP54P61011 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
SRP54P61011 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SRP54P61011 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.26□□□□□ -1.89
SRP54P61011 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
SRP54P61011 MIR135A2-201ENST00000384854 100 ntBASIC3.26□□□□□ -1.89
SRP54P61011 U3.42-201ENST00000408746 214 ntBASIC3.26□□□□□ -1.89
SRP54P61011 AC063979.1-201ENST00000415539 377 ntBASIC3.26□□□□□ -1.89
SRP54P61011 SDCBPP3-201ENST00000419629 891 ntBASIC3.26□□□□□ -1.89
SRP54P61011 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.26□□□□□ -1.89
SRP54P61011 AL513175.2-201ENST00000422071 443 ntBASIC3.26□□□□□ -1.89
SRP54P61011 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.26□□□□□ -1.89
SRP54P61011 AL512649.1-201ENST00000428997 581 ntBASIC3.26□□□□□ -1.89
SRP54P61011 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.26□□□□□ -1.89
SRP54P61011 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.26□□□□□ -1.89
SRP54P61011 RAC1P7-201ENST00000445367 377 ntBASIC3.26□□□□□ -1.89
SRP54P61011 OR6K5P-201ENST00000447050 945 ntBASIC3.26□□□□□ -1.89
SRP54P61011 AC115115.1-201ENST00000449927 248 ntBASIC3.26□□□□□ -1.89
SRP54P61011 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.26□□□□□ -1.89
SRP54P61011 ARPC3P2-201ENST00000457786 533 ntBASIC3.26□□□□□ -1.89
SRP54P61011 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.26□□□□□ -1.89
SRP54P61011 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.26□□□□□ -1.89
SRP54P61011 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.26□□□□□ -1.89
SRP54P61011 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.26□□□□□ -1.89
SRP54P61011 AC109445.1-201ENST00000512356 383 ntBASIC3.26□□□□□ -1.89
SRP54P61011 RNA5SP385-201ENST00000515947 110 ntBASIC3.26□□□□□ -1.89
SRP54P61011 RNY4P37-201ENST00000516225 96 ntBASIC3.26□□□□□ -1.89
SRP54P61011 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.26□□□□□ -1.89
SRP54P61011 AP001804.3-201ENST00000525146 880 ntBASIC3.26□□□□□ -1.89
SRP54P61011 AC022690.1-201ENST00000526681 550 ntBASIC3.26□□□□□ -1.89
SRP54P61011 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SRP54P61011 HIGD1AP1-201ENST00000550979 275 ntBASIC3.26□□□□□ -1.89
SRP54P61011 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.26□□□□□ -1.89
SRP54P61011 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.26□□□□□ -1.89
SRP54P61011 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.26□□□□□ -1.89
SRP54P61011 AC106900.2-201ENST00000604994 317 ntBASIC3.26□□□□□ -1.89
SRP54P61011 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.26□□□□□ -1.89
SRP54P61011 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.26□□□□□ -1.89
SRP54P61011 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
SRP54P61011 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SRP54P61011 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.26□□□□□ -1.89
SRP54P61011 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SRP54P61011 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SRP54P61011 RNU6-28P-201ENST00000362378 107 ntBASIC3.25□□□□□ -1.89
SRP54P61011 RNU4-68P-201ENST00000364314 141 ntBASIC3.25□□□□□ -1.89
SRP54P61011 Y_RNA.311-201ENST00000365068 96 ntBASIC3.25□□□□□ -1.89
SRP54P61011 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.25□□□□□ -1.89
SRP54P61011 AP002088.1-201ENST00000382740 395 ntBASIC3.25□□□□□ -1.89
SRP54P61011 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SRP54P61011 RNU2-43P-201ENST00000410306 190 ntBASIC3.25□□□□□ -1.89
SRP54P61011 RPL27AP8-201ENST00000424277 446 ntBASIC3.25□□□□□ -1.89
SRP54P61011 AC091390.3-201ENST00000426478 338 ntBASIC3.25□□□□□ -1.89
SRP54P61011 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.25□□□□□ -1.89
SRP54P61011 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms