Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AL583834.1-201ENST00000406943 343 ntBASIC3.41□□□□□ -1.86
CDH11P55287 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDH11P55287 SNORA57.3-201ENST00000411095 141 ntBASIC3.41□□□□□ -1.86
CDH11P55287 MTCO1P17-201ENST00000411522 491 ntBASIC3.41□□□□□ -1.86
CDH11P55287 AC109780.2-201ENST00000413467 845 ntBASIC3.41□□□□□ -1.86
CDH11P55287 AC245052.5-201ENST00000416320 649 ntBASIC3.41□□□□□ -1.86
CDH11P55287 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.41□□□□□ -1.86
CDH11P55287 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CDH11P55287 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH11P55287 MTND1P28-201ENST00000435623 950 ntBASIC3.41□□□□□ -1.86
CDH11P55287 AL353706.1-201ENST00000436728 494 ntBASIC3.41□□□□□ -1.86
CDH11P55287 RPS29P31-201ENST00000446147 164 ntBASIC3.41□□□□□ -1.86
CDH11P55287 AL592447.1-201ENST00000447592 540 ntBASIC3.41□□□□□ -1.86
CDH11P55287 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH11P55287 RNA5SP269-201ENST00000459032 137 ntBASIC3.41□□□□□ -1.86
CDH11P55287 AC068724.1-201ENST00000487100 792 ntBASIC3.41□□□□□ -1.86
CDH11P55287 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.41□□□□□ -1.86
CDH11P55287 AC010424.1-201ENST00000506336 297 ntBASIC3.41□□□□□ -1.86
CDH11P55287 RAC1P2-201ENST00000511164 579 ntBASIC3.41□□□□□ -1.86
CDH11P55287 AC022447.1-201ENST00000515358 464 ntBASIC3.41□□□□□ -1.86
CDH11P55287 SNORA67.7-201ENST00000516664 135 ntBASIC3.41□□□□□ -1.86
CDH11P55287 RNU6-714P-201ENST00000516963 103 ntBASIC3.41□□□□□ -1.86
CDH11P55287 IGKV2-23-201ENST00000518729 323 ntBASIC3.41□□□□□ -1.86
CDH11P55287 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.41□□□□□ -1.86
CDH11P55287 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH11P55287 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH11P55287 OR6C73P-201ENST00000546432 358 ntBASIC3.41□□□□□ -1.86
CDH11P55287 SETP7-201ENST00000552169 453 ntBASIC3.41□□□□□ -1.86
CDH11P55287 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH11P55287 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH11P55287 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH11P55287 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH11P55287 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH11P55287 KLKP1-201ENST00000595979 403 ntBASIC3.41□□□□□ -1.86
CDH11P55287 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH11P55287 AC119751.7-201ENST00000600494 245 ntBASIC3.41□□□□□ -1.86
CDH11P55287 AC112230.1-201ENST00000604342 547 ntBASIC3.41□□□□□ -1.86
CDH11P55287 AC004853.1-201ENST00000604902 698 ntBASIC3.41□□□□□ -1.86
CDH11P55287 HMGN2P28-201ENST00000606102 262 ntBASIC3.41□□□□□ -1.86
CDH11P55287 RNVU1-4-201ENST00000612985 164 ntBASIC3.41□□□□□ -1.86
CDH11P55287 AC005344.1-201ENST00000613391 459 ntBASIC3.41□□□□□ -1.86
CDH11P55287 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CDH11P55287 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDH11P55287 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDH11P55287 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH11P55287 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CDH11P55287 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDH11P55287 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDH11P55287 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDH11P55287 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CDH11P55287 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.4□□□□□ -1.86
CDH11P55287 CCT4P2-201ENST00000233836 1548 ntBASIC3.4□□□□□ -1.86
CDH11P55287 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
CDH11P55287 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.86
CDH11P55287 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CDH11P55287 AL161781.1-201ENST00000354277 403 ntBASIC3.4□□□□□ -1.87
CDH11P55287 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CDH11P55287 RNU6-359P-201ENST00000365466 108 ntBASIC3.4□□□□□ -1.87
CDH11P55287 Y_RNA.436-201ENST00000384097 102 ntBASIC3.4□□□□□ -1.87
CDH11P55287 U1.1-201ENST00000384101 164 ntBASIC3.4□□□□□ -1.87
CDH11P55287 Y_RNA.553-201ENST00000384670 102 ntBASIC3.4□□□□□ -1.87
CDH11P55287 MIR30B-201ENST00000384850 88 ntBASIC3.4□□□□□ -1.87
CDH11P55287 U8.14-201ENST00000390843 143 ntBASIC3.4□□□□□ -1.87
CDH11P55287 RN7SKP156-201ENST00000410308 342 ntBASIC3.4□□□□□ -1.87
CDH11P55287 AC092447.6-201ENST00000414578 210 ntBASIC3.4□□□□□ -1.87
CDH11P55287 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.4□□□□□ -1.87
CDH11P55287 AL513174.1-201ENST00000423182 629 ntBASIC3.4□□□□□ -1.87
CDH11P55287 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.4□□□□□ -1.87
CDH11P55287 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH11P55287 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.4□□□□□ -1.87
CDH11P55287 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH11P55287 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.4□□□□□ -1.87
CDH11P55287 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH11P55287 MTCO1P19-201ENST00000443487 500 ntBASIC3.4□□□□□ -1.87
CDH11P55287 VN1R34P-201ENST00000447387 883 ntBASIC3.4□□□□□ -1.87
CDH11P55287 ST13P20-201ENST00000447996 1065 ntBASIC3.4□□□□□ -1.87
CDH11P55287 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH11P55287 AL133547.1-201ENST00000448546 220 ntBASIC3.4□□□□□ -1.87
CDH11P55287 HMGB1P15-201ENST00000453854 435 ntBASIC3.4□□□□□ -1.87
CDH11P55287 SNRPGP9-201ENST00000456025 225 ntBASIC3.4□□□□□ -1.87
CDH11P55287 RPL23AP62-201ENST00000463396 453 ntBASIC3.4□□□□□ -1.87
CDH11P55287 RPS4XP10-201ENST00000465034 731 ntBASIC3.4□□□□□ -1.87
CDH11P55287 AP000797.1-201ENST00000478870 387 ntBASIC3.4□□□□□ -1.87
CDH11P55287 AC092104.1-201ENST00000497346 1441 ntBASIC3.4□□□□□ -1.87
CDH11P55287 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.4□□□□□ -1.87
CDH11P55287 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
CDH11P55287 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH11P55287 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
CDH11P55287 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH11P55287 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.4□□□□□ -1.87
CDH11P55287 AC091965.2-201ENST00000512324 613 ntBASIC3.4□□□□□ -1.87
CDH11P55287 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.4□□□□□ -1.87
CDH11P55287 AP003497.1-201ENST00000528472 562 ntBASIC3.4□□□□□ -1.87
CDH11P55287 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH11P55287 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH11P55287 AC083760.1-201ENST00000589621 670 ntBASIC3.4□□□□□ -1.87
CDH11P55287 RN7SKP299-201ENST00000606679 301 ntBASIC3.4□□□□□ -1.87
CDH11P55287 AC027807.2-201ENST00000616099 408 ntBASIC3.4□□□□□ -1.87
CDH11P55287 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH11P55287 AC009878.1-201ENST00000621819 340 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms