Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC009812.2-201ENST00000517657 457 ntBASIC3.41□□□□□ -1.86
GPC3P51654 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.41□□□□□ -1.86
GPC3P51654 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.41□□□□□ -1.86
GPC3P51654 AC055876.1-202ENST00000567053 138 ntBASIC3.41□□□□□ -1.86
GPC3P51654 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.41□□□□□ -1.86
GPC3P51654 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.41□□□□□ -1.86
GPC3P51654 AC093732.2-201ENST00000607950 274 ntBASIC3.41□□□□□ -1.86
GPC3P51654 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.41□□□□□ -1.86
GPC3P51654 AF129408.1-201ENST00000608767 431 ntBASIC3.41□□□□□ -1.86
GPC3P51654 AC093673.2-201ENST00000609674 331 ntBASIC3.41□□□□□ -1.86
GPC3P51654 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
GPC3P51654 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
GPC3P51654 AL355596.1-201ENST00000565399 3996 ntBASIC3.41□□□□□ -1.86
GPC3P51654 AC093908.1-201ENST00000623125 8092 ntBASIC3.41□□□□□ -1.86
GPC3P51654 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
GPC3P51654 SNORA71.1-201ENST00000364523 117 ntBASIC3.4□□□□□ -1.87
GPC3P51654 SNORD67-201ENST00000390833 111 ntBASIC3.4□□□□□ -1.87
GPC3P51654 RNU6-1176P-201ENST00000390955 107 ntBASIC3.4□□□□□ -1.87
GPC3P51654 RNA5SP38-201ENST00000410750 119 ntBASIC3.4□□□□□ -1.87
GPC3P51654 RPL32P35-201ENST00000415214 394 ntBASIC3.4□□□□□ -1.87
GPC3P51654 NDUFB4P5-201ENST00000415445 361 ntBASIC3.4□□□□□ -1.87
GPC3P51654 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.4□□□□□ -1.87
GPC3P51654 AC019178.2-201ENST00000423595 505 ntBASIC3.4□□□□□ -1.87
GPC3P51654 EZH2P1-201ENST00000431167 291 ntBASIC3.4□□□□□ -1.87
GPC3P51654 HSFY7P-201ENST00000432672 318 ntBASIC3.4□□□□□ -1.87
GPC3P51654 HSFY8P-201ENST00000437934 318 ntBASIC3.4□□□□□ -1.87
GPC3P51654 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.4□□□□□ -1.87
GPC3P51654 AC009969.1-201ENST00000438726 172 ntBASIC3.4□□□□□ -1.87
GPC3P51654 RPS12P18-201ENST00000442381 270 ntBASIC3.4□□□□□ -1.87
GPC3P51654 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.4□□□□□ -1.87
GPC3P51654 AC125238.1-201ENST00000448842 249 ntBASIC3.4□□□□□ -1.87
GPC3P51654 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.4□□□□□ -1.87
GPC3P51654 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.4□□□□□ -1.87
GPC3P51654 HSFY5P-201ENST00000453726 309 ntBASIC3.4□□□□□ -1.87
GPC3P51654 USP9YP34-201ENST00000453983 808 ntBASIC3.4□□□□□ -1.87
GPC3P51654 PNPLA4P1-201ENST00000458328 305 ntBASIC3.4□□□□□ -1.87
GPC3P51654 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.4□□□□□ -1.87
GPC3P51654 AC108860.1-201ENST00000484521 383 ntBASIC3.4□□□□□ -1.87
GPC3P51654 AC111000.2-201ENST00000507775 550 ntBASIC3.4□□□□□ -1.87
GPC3P51654 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.4□□□□□ -1.87
GPC3P51654 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.4□□□□□ -1.87
GPC3P51654 SETP7-201ENST00000552169 453 ntBASIC3.4□□□□□ -1.87
GPC3P51654 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.4□□□□□ -1.87
GPC3P51654 FAM35CP-201ENST00000554755 2470 ntBASIC3.4□□□□□ -1.87
GPC3P51654 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.4□□□□□ -1.87
GPC3P51654 YWHAZP1-201ENST00000556286 722 ntBASIC3.4□□□□□ -1.87
GPC3P51654 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.4□□□□□ -1.87
GPC3P51654 MIR5708-201ENST00000579723 85 ntBASIC3.4□□□□□ -1.87
GPC3P51654 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.4□□□□□ -1.87
GPC3P51654 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.4□□□□□ -1.87
GPC3P51654 BNIP3P11-201ENST00000603878 563 ntBASIC3.4□□□□□ -1.87
GPC3P51654 AL445435.1-201ENST00000604232 665 ntBASIC3.4□□□□□ -1.87
GPC3P51654 AL139022.2-201ENST00000606934 443 ntBASIC3.4□□□□□ -1.87
GPC3P51654 AC107294.3-201ENST00000609211 526 ntBASIC3.4□□□□□ -1.87
GPC3P51654 CYCSP41-201ENST00000616920 296 ntBASIC3.4□□□□□ -1.87
GPC3P51654 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.4□□□□□ -1.87
GPC3P51654 U6.101-201ENST00000637707 76 ntBASIC3.4□□□□□ -1.87
GPC3P51654 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
GPC3P51654 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
GPC3P51654 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.39□□□□□ -1.87
GPC3P51654 MIR493-201ENST00000385254 89 ntBASIC3.39□□□□□ -1.87
GPC3P51654 RPL5P18-201ENST00000406671 891 ntBASIC3.39□□□□□ -1.87
GPC3P51654 VN1R51P-201ENST00000411675 945 ntBASIC3.39□□□□□ -1.87
GPC3P51654 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.39□□□□□ -1.87
GPC3P51654 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.39□□□□□ -1.87
GPC3P51654 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.39□□□□□ -1.87
GPC3P51654 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.39□□□□□ -1.87
GPC3P51654 MTCYBP11-201ENST00000447254 1109 ntBASIC3.39□□□□□ -1.87
GPC3P51654 SUMO2P2-201ENST00000456482 255 ntBASIC3.39□□□□□ -1.87
GPC3P51654 FCF1P6-201ENST00000456841 595 ntBASIC3.39□□□□□ -1.87
GPC3P51654 VN1R104P-201ENST00000505115 1009 ntBASIC3.39□□□□□ -1.87
GPC3P51654 COX7A2P2-201ENST00000505291 250 ntBASIC3.39□□□□□ -1.87
GPC3P51654 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.39□□□□□ -1.87
GPC3P51654 AC069306.1-201ENST00000507006 843 ntBASIC3.39□□□□□ -1.87
GPC3P51654 RNU1-103P-201ENST00000516502 125 ntBASIC3.39□□□□□ -1.87
GPC3P51654 RNU6-1261P-201ENST00000517194 104 ntBASIC3.39□□□□□ -1.87
GPC3P51654 FAM60DP-201ENST00000524174 632 ntBASIC3.39□□□□□ -1.87
GPC3P51654 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
GPC3P51654 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.39□□□□□ -1.87
GPC3P51654 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.39□□□□□ -1.87
GPC3P51654 H3F3AP1-201ENST00000559984 334 ntBASIC3.39□□□□□ -1.87
GPC3P51654 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.39□□□□□ -1.87
GPC3P51654 MTCO3P24-201ENST00000572729 782 ntBASIC3.39□□□□□ -1.87
GPC3P51654 LARP7P3-201ENST00000579888 337 ntBASIC3.39□□□□□ -1.87
GPC3P51654 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.39□□□□□ -1.87
GPC3P51654 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.39□□□□□ -1.87
GPC3P51654 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.39□□□□□ -1.87
GPC3P51654 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.39□□□□□ -1.87
GPC3P51654 AC022306.3-201ENST00000619930 550 ntBASIC3.39□□□□□ -1.87
GPC3P51654 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.39□□□□□ -1.87
GPC3P51654 AP003485.1-201ENST00000625093 753 ntBASIC3.39□□□□□ -1.87
GPC3P51654 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
GPC3P51654 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.39□□□□□ -1.87
GPC3P51654 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
GPC3P51654 AC010733.2-201ENST00000589496 5702 ntBASIC3.38□□□□□ -1.87
GPC3P51654 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
GPC3P51654 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
GPC3P51654 MIR22-201ENST00000362190 85 ntBASIC3.38□□□□□ -1.87
GPC3P51654 Y_RNA.111-201ENST00000363248 100 ntBASIC3.38□□□□□ -1.87
GPC3P51654 U3.6-201ENST00000363622 211 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms