Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.47□□□□□ -1.53
RNF144AP50876 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNF144AP50876 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNF144AP50876 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
RNF144AP50876 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RNF144AP50876 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNF144AP50876 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
RNF144AP50876 HAUS6P2-201ENST00000433254 2404 ntBASIC5.47□□□□□ -1.53
RNF144AP50876 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.47□□□□□ -1.53
RNF144AP50876 AC092747.4-201ENST00000620519 1861 ntBASIC5.47□□□□□ -1.53
RNF144AP50876 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNF144AP50876 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
RNF144AP50876 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RNF144AP50876 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.47□□□□□ -1.53
RNF144AP50876 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.47□□□□□ -1.53
RNF144AP50876 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
RNF144AP50876 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
RNF144AP50876 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
RNF144AP50876 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
RNF144AP50876 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
RNF144AP50876 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
RNF144AP50876 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
RNF144AP50876 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
RNF144AP50876 IQCB2P-201ENST00000401788 1633 ntBASIC5.46□□□□□ -1.54
RNF144AP50876 PARP4P2-201ENST00000446672 3326 ntBASIC5.46□□□□□ -1.54
RNF144AP50876 RNA5SP453-201ENST00000362503 119 ntBASIC5.46□□□□□ -1.54
RNF144AP50876 RNU6-595P-201ENST00000363944 107 ntBASIC5.46□□□□□ -1.54
RNF144AP50876 RN7SKP128-201ENST00000364270 303 ntBASIC5.46□□□□□ -1.54
RNF144AP50876 RN7SKP187-201ENST00000365536 330 ntBASIC5.46□□□□□ -1.54
RNF144AP50876 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.46□□□□□ -1.54
RNF144AP50876 RNY1P5-201ENST00000383890 115 ntBASIC5.46□□□□□ -1.54
RNF144AP50876 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.46□□□□□ -1.54
RNF144AP50876 AC007679.3-201ENST00000434035 414 ntBASIC5.46□□□□□ -1.54
RNF144AP50876 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.46□□□□□ -1.54
RNF144AP50876 TPT1P13-201ENST00000449760 499 ntBASIC5.46□□□□□ -1.54
RNF144AP50876 AL133445.1-201ENST00000467051 452 ntBASIC5.46□□□□□ -1.54
RNF144AP50876 AC010469.2-201ENST00000496412 480 ntBASIC5.46□□□□□ -1.54
RNF144AP50876 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.46□□□□□ -1.54
RNF144AP50876 AC114781.3-201ENST00000512083 142 ntBASIC5.46□□□□□ -1.54
RNF144AP50876 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.46□□□□□ -1.54
RNF144AP50876 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RNF144AP50876 AC079905.1-201ENST00000549280 475 ntBASIC5.46□□□□□ -1.54
RNF144AP50876 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.46□□□□□ -1.54
RNF144AP50876 AC107958.1-201ENST00000556576 290 ntBASIC5.46□□□□□ -1.54
RNF144AP50876 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC5.46□□□□□ -1.54
RNF144AP50876 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.46□□□□□ -1.54
RNF144AP50876 AC091953.5-201ENST00000622919 233 ntBASIC5.46□□□□□ -1.54
RNF144AP50876 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RNF144AP50876 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RNF144AP50876 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNF144AP50876 AP004607.3-201ENST00000530354 3915 ntBASIC5.46□□□□□ -1.54
RNF144AP50876 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
RNF144AP50876 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.46□□□□□ -1.54
RNF144AP50876 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNF144AP50876 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNF144AP50876 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNF144AP50876 AC004158.1-201ENST00000564508 4319 ntBASIC5.45□□□□□ -1.54
RNF144AP50876 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.45□□□□□ -1.54
RNF144AP50876 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
RNF144AP50876 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.45□□□□□ -1.54
RNF144AP50876 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
RNF144AP50876 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNF144AP50876 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
RNF144AP50876 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RNF144AP50876 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RNF144AP50876 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RNF144AP50876 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.45□□□□□ -1.54
RNF144AP50876 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RNF144AP50876 Y_RNA.81-201ENST00000362997 102 ntBASIC5.45□□□□□ -1.54
RNF144AP50876 Y_RNA.143-201ENST00000363520 106 ntBASIC5.45□□□□□ -1.54
RNF144AP50876 U3.13-201ENST00000364804 214 ntBASIC5.45□□□□□ -1.54
RNF144AP50876 Y_RNA.541-201ENST00000384640 113 ntBASIC5.45□□□□□ -1.54
RNF144AP50876 RNU2-20P-201ENST00000410425 191 ntBASIC5.45□□□□□ -1.54
RNF144AP50876 RPS4XP5-201ENST00000419038 768 ntBASIC5.45□□□□□ -1.54
RNF144AP50876 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.45□□□□□ -1.54
RNF144AP50876 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.45□□□□□ -1.54
RNF144AP50876 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.45□□□□□ -1.54
RNF144AP50876 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.45□□□□□ -1.54
RNF144AP50876 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.45□□□□□ -1.54
RNF144AP50876 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.45□□□□□ -1.54
RNF144AP50876 AC109925.1-201ENST00000478069 331 ntBASIC5.45□□□□□ -1.54
RNF144AP50876 MIR2117-201ENST00000516780 80 ntBASIC5.45□□□□□ -1.54
RNF144AP50876 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.45□□□□□ -1.54
RNF144AP50876 MRPS36P4-201ENST00000534436 298 ntBASIC5.45□□□□□ -1.54
RNF144AP50876 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF144AP50876 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.45□□□□□ -1.54
RNF144AP50876 AC025884.1-201ENST00000556034 378 ntBASIC5.45□□□□□ -1.54
RNF144AP50876 CYCSP38-201ENST00000559840 322 ntBASIC5.45□□□□□ -1.54
RNF144AP50876 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.45□□□□□ -1.54
RNF144AP50876 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
RNF144AP50876 Z83818.1-201ENST00000603584 150 ntBASIC5.45□□□□□ -1.54
RNF144AP50876 U2.14-201ENST00000615943 113 ntBASIC5.45□□□□□ -1.54
RNF144AP50876 MIR6071-201ENST00000616741 78 ntBASIC5.45□□□□□ -1.54
RNF144AP50876 AL591926.1-201ENST00000620542 217 ntBASIC5.45□□□□□ -1.54
RNF144AP50876 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNF144AP50876 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF144AP50876 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RNF144AP50876 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.45□□□□□ -1.54
RNF144AP50876 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNF144AP50876 AC005224.3-201ENST00000584683 2140 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms